C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SMT3 suppressor of mif two 3 homolog 2, pseudogene 4 (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121569 Smt3h2-ps4-001 ENSMUSG00000081201 10090 - 1:14839869-14840156 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverMusclePlacentaTestisENSMUST00000121569
Transcript ID Bladder Brain Liver Muscle Placenta Testis
ENSMUST00000121569 4.314±1.26 4.837±3.52 5.858±3.49 0.413±0.26 0.037±0.00 0.623±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003FQ CIL_0003FQ_0002 CGP 1:14753346-14918862

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314523 SUMO2-002 protein_coding Homo_sapiens 0 255
ENST00000326669 SUMO4-001 protein_coding Homo_sapiens 0 368
ENST00000404494 RP3-509I19.6-001 transcribed_processed_pseudogene Homo_sapiens 0 261
ENST00000405924 SUMO2P12-001 processed_pseudogene Homo_sapiens 1.99993e-41 171
ENST00000414746 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000415468 AC079809.2-001 processed_pseudogene Homo_sapiens 0 305
ENST00000417139 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000418008 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000420826 SUMO2-001 protein_coding Homo_sapiens 0 457
ENST00000427515 RP11-184I16.3-001 processed_pseudogene Homo_sapiens 0 252
ENST00000428065 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000428741 RP11-4K3__A.3-001 processed_pseudogene Homo_sapiens 0 283
ENST00000434672 SUMO2P8-001 processed_pseudogene Homo_sapiens 0 350
ENST00000436431 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000438311 SUMO2P3-001 processed_pseudogene Homo_sapiens 0 401
ENST00000443604 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000445436 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000452006 SUMO2P10-001 processed_pseudogene Homo_sapiens 0 342
ENST00000455040 SUMO2P1-001 processed_pseudogene Homo_sapiens 0 425
ENST00000456482 SUMO2P2-001 processed_pseudogene Homo_sapiens 3e-17 92
ENST00000504193 SUMO2P4-002 processed_pseudogene Homo_sapiens 0 339
ENST00000504438 SUMO2P17-001 transcribed_processed_pseudogene Homo_sapiens 0 392
ENST00000505273 SUMO2P6-001 processed_pseudogene Homo_sapiens 0 401
ENST00000506790 SUMO2P5-001 processed_pseudogene Homo_sapiens 6.02558e-44 180
ENST00000508743 SUMO2P17-002 processed_transcript Homo_sapiens 4.2039e-45 185
ENST00000511179 SUMO2P7-001 processed_pseudogene Homo_sapiens 0 344
ENST00000518873 SUMO2P18-001 processed_pseudogene Homo_sapiens 0.000001 57
ENST00000520803 SUMO2P20-001 processed_pseudogene Homo_sapiens 0 351
ENST00000536192 RP1-241P17.4-001 processed_pseudogene Homo_sapiens 0 451
ENST00000572284 RP3-509I19.6-002 processed_transcript Homo_sapiens 0 261
ENST00000578238 SUMO2-003 protein_coding Homo_sapiens 0 436
ENST00000588843 RP11-49K24.5-001 processed_pseudogene Homo_sapiens 0 342

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