C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | COP9 signalosome subunit 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000509093  |
COPS4-002 |
ENSG00000138663 |
9606 | + |
4:83034447-83075789  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00052W | CIL_00052W_0002 | CGP | 4:82909973-83075818 |
| CIL_00052V | CIL_00052V_0002 | CGP | 4:83034447-83137075 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000338 | IMP | protein deneddylation |
| GO:0005515 | IPI:IEA | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0008021 | IDA | synaptic vesicle |
| GO:0008180 | IDA | COP9 signalosome |
| GO:0010388 | IDA | cullin deneddylation |
| GO:0030054 | IDA | cell junction |
| GO:0070062 | IDA | extracellular vesicular exosome |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000045993
|
Cops4-001 | protein_coding | Mus_musculus | 0 | 1441 |
|
ENSMUST00000123492
|
Cops4-007 | nonsense_mediated_decay | Mus_musculus | 0 | 1003 |
|
ENSMUST00000151414
|
Cops4-006 | protein_coding | Mus_musculus | 0 | 922 |
|
ENSMUST00000146476
|
Cops4-005 | protein_coding | Mus_musculus | 0 | 889 |
|
ENSMUST00000123559
|
Cops4-003 | retained_intron | Mus_musculus | 0 | 789 |
|
ENSMUST00000123069
|
Cops4-004 | nonsense_mediated_decay | Mus_musculus | 0 | 608 |
|
ENSMUST00000147729
|
Cops4-002 | retained_intron | Mus_musculus | 0 | 562 |
