C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SEC11 homolog C (S. cerevisiae)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000509791 SEC11C-005 ENSG00000166562 9606 + 18:59139866-59157311 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastENST00000509791
Transcript ID Bladder Breast
ENST00000509791 0.518±0.00 0.742±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006O6 CIL_0006O6_0001 CGP 18:59139477-59230774

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006465 IEA signal peptide processing
GO:0008233 IEA peptidase activity
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025394 Sec11c-001 protein_coding Mus_musculus 0 704
ENSMUST00000125552 Sec11c-006 processed_transcript Mus_musculus 0 549
ENSMUST00000139538 Sec11c-003 retained_intron Mus_musculus 0 472
ENSMUST00000155668 Sec11c-005 processed_transcript Mus_musculus 0 305
ENSMUST00000126651 Sec11c-007 processed_transcript Mus_musculus 4.2039e-45 187
ENSMUST00000126432 Sec11c-002 nonsense_mediated_decay Mus_musculus 4.2039e-45 187
ENSMUST00000074912 2010012O05Rik-201 protein_coding Mus_musculus 0.00000006 64

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