C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000510729 PPIAP11-001 ENSG00000251495 9606 - 5:82009602-82010094 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000510729
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000510729 0.151±0.00 0.158±0.00 0.260±0.04 0.902±0.71 0.158±0.07 0.079±0.01 0.411±0.00 0.129±0.01 1.388±0.00 0.028±0.00 0.250±0.14 0.697±0.18 0.058±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005TK CIL_0005TK_0002 CGP 5:81413021-82276857
CIL_000922 CIL_000922_0001 VISTA 5:81723063-82325864

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 671
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 667
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 654
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 643
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 638
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 612
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 608
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 586
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 575
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 571
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 542
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 510
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 508
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 494
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 435
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 320
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 315
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 291
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 254
ENSMUST00000185012 Gm12728-003 protein_coding Mus_musculus 0 254
ENSMUST00000184254 Gm12728-002 protein_coding Mus_musculus 0 254
ENSMUST00000121356 Gm6079-001 processed_pseudogene Mus_musculus 8.00001e-41 171
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 6e-27 124

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