C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protocadherin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000511044 PCDH1-004 ENSG00000156453 9606 - 5:141862885-141866202 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENST00000511044
Transcript ID Ovary
ENST00000511044 3.174±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006QH CIL_0006QH_0001 CGP 5:141653401-141879246
CIL_0006QI CIL_0006QI_0001 CGP 5:141853111-141942047

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159405 Pcdh1-005 protein_coding Mus_musculus 0 2867
ENSMUST00000057185 Pcdh1-001 protein_coding Mus_musculus 0 2867
ENSMUST00000161701 Pcdh1-002 protein_coding Mus_musculus 0 2732

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