C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006QI_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000156453-ENSG00000081791 CGP 9606 5:141853111-141942047
GeneTranscriptPositionBiotype
ENSG00000081791 (KIAA0141)
KIAA0141 		ENST00000194118 (KIAA0141-003) 141923855-141940120 protein_coding
ENST00000432126 (KIAA0141-001) 141923808-141942047 protein_coding
ENST00000502729 (KIAA0141-006) 141930247-141934996 retained_intron
ENST00000506775 (KIAA0141-004) 141931219-141933882 processed_transcript
ENST00000507481 (KIAA0141-002) 141934240-141940146 protein_coding
ENST00000508751 (KIAA0141-005) 141923910-141934326 protein_coding
ENST00000509110 (KIAA0141-007) 141937074-141938948 retained_intron
ENSG00000156453 (PCDH1)
protocadherin 1 		ENST00000287008 (PCDH1-002) 141853111-141878410 protein_coding
ENST00000357517 (PCDH1-005) 141863057-141869589 processed_transcript
ENST00000394536 (PCDH1-001) 141862652-141878410 protein_coding
ENST00000503492 (PCDH1-003) 141853373-141878409 protein_coding
ENST00000505937 (PCDH1-008) 141865062-141868882 nonsense_mediated_decay
ENST00000511044 (PCDH1-004) 141862885-141866202 processed_transcript
ENST00000514773 (PCDH1-007) 141868954-141879246 protein_coding
ENST00000515351 (PCDH1-006) 141863013-141868575 protein_coding
ENSG00000226040 (AC005740.3)
 ENST00000515639 (AC005740.3-001) 141896168-141896689 processed_pseudogene
CIL_0006QI_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051375-ENSMUSG00000024442 CGP 10090 18:38185915-38262629
GeneTranscriptPositionBiotype
ENSMUSG00000024442 (0610009O20Rik)
RIKEN cDNA 0610009O20 gene 		ENSMUST00000025314 (0610009O20Rik-201) 38250249-38262629 protein_coding
ENSMUSG00000051375 (Pcdh1)
protocadherin 1 		ENSMUST00000057185 (Pcdh1-001) 38196694-38209762 protein_coding
ENSMUST00000159405 (Pcdh1-005) 38196743-38211970 protein_coding
ENSMUST00000160721 (Pcdh1-004) 38185915-38212053 protein_coding
ENSMUST00000161701 (Pcdh1-002) 38188888-38203163 protein_coding
ENSMUSG00000066475 (Gm10268)
predicted gene 10268 		ENSMUST00000085340 (Gm10268-201) 38244828-38245382 processed_pseudogene
ENSMUSG00000089983 (2010320O07Rik)
RIKEN cDNA 2010320O07 gene 		ENSMUST00000160935 (2010320O07Rik-001) 38209772-38229145 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QI_0001ENSG00000081791ENST00000194118ENST00000432126ENST00000502729ENST00000506775ENST00000507481ENST00000508751ENST00000509110ENSG00000156453ENST00000287008ENST00000357517ENST00000394536ENST00000503492ENST00000505937ENST00000511044ENST00000514773ENST00000515351ENSG00000226040ENST00000515639CIL_0006QI_0002ENSMUSG00000024442ENSMUST00000025314ENSMUSG00000051375ENSMUST00000057185ENSMUST00000159405ENSMUST00000160721ENSMUST00000161701ENSMUSG00000066475ENSMUST00000085340ENSMUSG00000089983ENSMUST00000160935
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006QI_0001ENSG00000081791ENST00000194118ENST00000432126ENST00000502729ENST00000507481ENST00000508751ENSG00000156453ENST00000287008ENST00000357517ENST00000394536ENST00000511044ENST00000515351ENSG00000226040ENST00000515639CIL_0006QI_0002ENSMUSG00000024442ENSMUST00000025314ENSMUSG00000051375ENSMUST00000057185ENSMUST00000159405ENSMUST00000160721ENSMUST00000161701ENSMUSG00000066475ENSMUST00000085340ENSMUSG00000089983ENSMUST00000160935
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000081791 ENST00000194118 7.948±0.00 10.794±0.00 N/A 2.725±0.00 6.143±0.00 5.058±0.00 9.695±0.00 4.870±3.36 N/A 7.084±0.00 6.606±0.00 7.089±3.32 13.126±4.05 5.114±0.39
ENST00000432126 1.562±0.00 N/A 0.707±0.00 1.302±0.14 2.026±0.00 2.029±0.00 0.930±0.00 3.489±1.14 1.691±0.46 1.331±0.00 0.535±0.37 4.312±0.36 2.667±1.39 2.439±0.00
ENST00000502729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.544±0.00 16.330±0.00 7.877±0.00
ENST00000506775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507481 4.401±0.00 N/A 1.248±0.00 2.815±0.00 3.408±0.00 3.140±0.00 N/A 6.810±0.00 8.050±0.00 8.894±0.00 3.580±0.06 6.305±0.81 6.879±0.00 6.249±2.23
ENST00000508751 N/A N/A N/A 3.245±0.00 2.536±0.00 3.958±0.00 2.573±0.00 3.697±0.00 N/A N/A 3.525±2.39 N/A N/A N/A
ENST00000509110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000156453 ENST00000287008 N/A N/A 0.746±0.00 4.656±0.00 1.548±0.00 3.133±0.00 1.636±1.06 1.186±0.00 1.044±0.00 N/A N/A 0.841±0.04 3.892±0.00 0.926±0.00
ENST00000357517 N/A N/A 1.018±0.00 1.390±0.00 4.065±0.00 3.790±0.00 0.636±0.00 5.249±0.00 1.635±0.00 N/A 1.145±0.00 1.406±0.00 N/A N/A
ENST00000394536 9.719±0.00 8.307±0.00 N/A N/A 3.792±2.74 5.172±4.14 5.162±0.00 21.138±0.00 12.686±0.00 12.876±10.13 0.785±0.50 1.474±0.48 16.057±8.40 1.257±0.99
ENST00000503492 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505937 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.174±0.00 N/A N/A
ENST00000514773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515351 N/A N/A 1.681±0.00 N/A N/A N/A N/A N/A N/A N/A 1.164±0.00 2.437±0.00 4.407±0.00 N/A
ENSG00000226040 ENST00000515639 N/A 0.029±0.00 N/A 0.140±0.00 N/A N/A N/A N/A N/A N/A N/A 0.127±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024442 ENSMUST00000025314 23.379±2.77 44.557±19.95 16.853±2.00 12.447±5.79 17.939±8.53 24.579±10.07 53.695±22.76 33.480±7.96 22.644±6.38 19.474±4.43 41.828±1.96 28.269±9.31 22.889±9.49 18.512±7.79
ENSMUSG00000051375 ENSMUST00000057185 N/A N/A 0.956±0.00 N/A N/A 7.081±1.32 N/A N/A 1.920±1.70 N/A 0.763±0.19 2.401±0.00 3.540±2.56 N/A
ENSMUST00000159405 2.620±0.51 1.100±0.20 1.963±0.67 N/A 2.181±0.54 5.103±1.06 1.297±0.16 2.462±0.38 3.060±2.43 19.237±4.48 0.904±0.22 1.206±1.05 5.900±3.35 N/A
ENSMUST00000160721 N/A 0.958±0.19 N/A N/A N/A 1.504±0.18 N/A N/A N/A 5.154±0.39 N/A 0.542±0.03 0.891±0.00 1.620±0.11
ENSMUST00000161701 1.986±0.62 2.019±0.19 1.058±0.56 3.669±2.17 1.968±0.45 4.630±0.57 0.927±0.44 3.293±0.36 2.604±2.08 11.731±1.00 0.432±0.10 0.944±0.29 3.100±0.90 1.203±0.36
ENSMUSG00000066475 ENSMUST00000085340 1.278±0.29 1.319±0.99 0.969±0.07 0.861±0.57 1.020±0.41 0.981±0.36 0.784±0.27 0.912±0.45 1.335±0.97 1.188±0.32 0.154±0.03 1.549±0.98 0.584±0.41 0.364±0.15
ENSMUSG00000089983 ENSMUST00000160935 0.078±0.00 N/A 0.205±0.03 0.323±0.33 N/A 0.338±0.16 0.146±0.00 0.119±0.05 0.033±0.00 0.119±0.02 N/A 0.168±0.00 0.130±0.08 N/A

Loading