C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actinin, alpha 4 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000514175 ACTN4P1-001 ENSG00000213493 9606 + 4:116598161-116599611 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000514175
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000514175 0.049±0.00 0.056±0.00 0.067±0.00 0.085±0.00 0.172±0.00 0.062±0.00 0.034±0.00 0.060±0.00 0.016±0.00 0.023±0.00 0.040±0.01 0.360±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144909 Actn4-002 processed_transcript Mus_musculus 0 1672
ENSMUST00000068045 Actn4-001 protein_coding Mus_musculus 0 1672
ENSMUST00000021554 Actn1-201 protein_coding Mus_musculus 0 784
ENSMUST00000167327 Actn1-202 protein_coding Mus_musculus 0 682
ENSDART00000100217 actn1-201 protein_coding Danio_rerio 0 536
ENSDART00000133740 actn1-002 nonsense_mediated_decay Danio_rerio 0 536
ENSDART00000140243 actn1-001 protein_coding Danio_rerio 0 536
ENSDART00000123678 actn1-202 protein_coding Danio_rerio 0 446
ENSMUST00000143584 Actn4-007 retained_intron Mus_musculus 0 353
ENSMUST00000129338 Actn4-008 retained_intron Mus_musculus 0 348

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