C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008PQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2029 VISTA 9606 8:58557235-59160028
GeneTranscriptPositionBiotype
ENSG00000035681 (NSMAF)
neutral sphingomyelinase (N-SMase) activation associated factor 		ENST00000038176 (NSMAF-001) 58583504-58659844 protein_coding
ENST00000427130 (NSMAF-002) 58583770-58659534 protein_coding
ENST00000517612 (NSMAF-010) 58586349-58591009 retained_intron
ENST00000518159 (NSMAF-003) 58623751-58659664 nonsense_mediated_decay
ENST00000518229 (NSMAF-004) 58623747-58659638 nonsense_mediated_decay
ENST00000519166 (NSMAF-009) 58589522-58594300 retained_intron
ENST00000519174 (NSMAF-014) 58590866-58594747 retained_intron
ENST00000519227 (NSMAF-006) 58597473-58600178 retained_intron
ENST00000519858 (NSMAF-012) 58601168-58623419 processed_transcript
ENST00000519871 (NSMAF-017) 58631428-58659214 retained_intron
ENST00000521712 (NSMAF-015) 58586359-58589656 retained_intron
ENST00000521972 (NSMAF-011) 58583809-58586578 retained_intron
ENST00000522645 (NSMAF-005) 58631365-58659698 retained_intron
ENST00000523106 (NSMAF-007) 58590001-58599480 retained_intron
ENST00000523177 (NSMAF-013) 58587649-58595902 processed_transcript
ENST00000523982 (NSMAF-016) 58597403-58600178 processed_transcript
ENST00000524148 (NSMAF-008) 58589752-58594878 retained_intron
ENSG00000137575 (SDCBP)
syndecan binding protein (syntenin) 		ENST00000260130 (SDCBP-001) 58553169-58582860 protein_coding
ENST00000413219 (SDCBP-002) 58553217-58582830 protein_coding
ENST00000424270 (SDCBP-004) 58553237-58582056 protein_coding
ENST00000447182 (SDCBP-003) 58553216-58582846 protein_coding
ENST00000447267 (SDCBP-012) 58565016-58581759 protein_coding
ENST00000519115 (SDCBP-013) 58553261-58578384 retained_intron
ENST00000520168 (SDCBP-006) 58553255-58582053 protein_coding
ENST00000520228 (SDCBP-009) 58570712-58578070 retained_intron
ENST00000522243 (SDCBP-008) 58552924-58572301 processed_transcript
ENST00000522843 (SDCBP-010) 58553262-58576366 retained_intron
ENST00000523441 (SDCBP-011) 58577993-58579949 retained_intron
ENST00000523483 (SDCBP-005) 58553254-58582858 protein_coding
ENSG00000167912 (RP11-25K19.1)
 ENST00000517898 (RP11-25K19.1-002) 59119946-59121315 antisense
ENST00000518993 (RP11-25K19.1-001) 59119218-59121346 antisense
ENST00000523683 (RP11-25K19.1-003) 59119040-59120031 antisense
ENSG00000198846 (TOX)
thymocyte selection-associated high mobility group box 		ENST00000361421 (TOX-001) 58805418-59119208 protein_coding
ENSG00000242970 (AC068522.4)
 ENST00000482895 (AC068522.4-001) 58588420-58588764 processed_pseudogene
ENSG00000254048 (RP11-328K2.1)
 ENST00000518011 (RP11-328K2.1-001) 58991720-58992938 sense_intronic
CIL_0008PQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2029 VISTA 10090 4:6445236-7047592
GeneTranscriptPositionBiotype
ENSMUSG00000028245 (Nsmaf)
neutral sphingomyelinase (N-SMase) activation associated factor 		ENSMUST00000029910 (Nsmaf-001) 6396207-6454271 protein_coding
ENSMUST00000124344 (Nsmaf-011) 6433272-6454097 protein_coding
ENSMUST00000124656 (Nsmaf-008) 6437913-6444393 processed_transcript
ENSMUST00000143566 (Nsmaf-003) 6406400-6454255 processed_transcript
ENSMUST00000143704 (Nsmaf-002) 6396207-6454271 retained_intron
ENSMUST00000143983 (Nsmaf-009) 6424570-6432698 retained_intron
ENSMUST00000145399 (Nsmaf-005) 6429729-6446327 processed_transcript
ENSMUST00000149015 (Nsmaf-010) 6396411-6399006 retained_intron
ENSMUST00000156078 (Nsmaf-004) 6409019-6423988 retained_intron
ENSMUST00000156283 (Nsmaf-007) 6428450-6453579 processed_transcript
ENSMUST00000156715 (Nsmaf-006) 6396769-6454096 processed_transcript
ENSMUSG00000041272 (Tox)
thymocyte selection-associated high mobility group box 		ENSMUST00000039987 (Tox-001) 6686353-6990799 protein_coding
ENSMUST00000125974 (Tox-003) 6688046-6689351 processed_transcript
ENSMUST00000147657 (Tox-002) 6740230-6991557 retained_intron
ENSMUST00000150082 (Tox-004) 6820694-6990483 retained_intron
ENSMUSG00000081388 (Gm11801)
predicted gene 11801 		ENSMUST00000117807 (Gm11801-001) 6539561-6540306 processed_pseudogene
ENSMUSG00000083023 (Gm11804)
predicted gene 11804 		ENSMUST00000121663 (Gm11804-001) 7039047-7039514 processed_pseudogene
ENSMUSG00000086052 (Gm11802)
predicted gene 11802 		ENSMUST00000137749 (Gm11802-001) 6688169-6704160 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008PQ_0001ENSG00000035681ENST00000038176ENST00000427130ENST00000519227ENST00000519858ENST00000522645ENSG00000137575ENST00000260130ENST00000413219ENST00000424270ENST00000447182ENST00000447267ENST00000519115ENST00000520228ENST00000522843ENSG00000167912ENST00000517898ENST00000518993ENSG00000198846ENST00000361421ENSG00000242970ENST00000482895ENSG00000254048ENST00000518011CIL_0008PQ_0002ENSMUSG00000028245ENSMUST00000029910ENSMUST00000149015ENSMUSG00000041272ENSMUST00000039987ENSMUST00000125974ENSMUST00000147657ENSMUSG00000081388ENSMUST00000117807ENSMUSG00000083023ENSMUST00000121663ENSMUSG00000086052ENSMUST00000137749
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000035681 ENST00000038176 5.750±0.00 6.152±0.00 1.132±0.00 1.258±0.00 2.921±1.91 4.016±0.48 2.510±1.50 1.356±0.74 0.764±0.00 3.515±0.11 2.927±0.00 3.340±1.27 3.677±1.28 2.411±1.16
ENST00000427130 1.866±0.00 N/A N/A N/A 1.042±0.29 N/A 0.623±0.00 1.675±0.00 N/A N/A 0.798±0.00 N/A 1.045±0.22 0.805±0.00
ENST00000517612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.668±0.00
ENST00000519858 N/A N/A 3.054±0.00 5.733±0.00 4.118±0.00 N/A N/A 1.367±0.00 7.217±0.00 6.001±0.00 8.037±0.00 8.263±0.00 N/A N/A
ENST00000519871 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521972 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.123±0.00 N/A N/A N/A
ENST00000523106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523177 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137575 ENST00000260130 47.072±0.00 27.546±0.00 N/A 14.568±0.00 33.881±0.00 32.431±0.00 7.171±0.00 8.824±0.00 3.702±0.00 49.309±0.00 4.005±0.00 15.567±8.50 14.264±2.39 20.945±0.00
ENST00000413219 N/A 9.179±0.00 N/A N/A 5.648±0.00 N/A 12.665±0.00 12.824±9.96 6.273±0.00 17.511±8.98 5.445±0.00 28.228±0.00 55.519±2.44 7.017±0.00
ENST00000424270 52.704±0.00 14.841±0.00 2.508±0.00 17.339±0.00 19.882±0.00 15.747±7.91 5.984±0.00 4.834±0.00 N/A N/A 4.184±1.62 20.060±9.10 88.209±0.00 9.639±0.00
ENST00000447182 42.804±0.00 20.402±0.00 3.280±0.00 13.177±6.61 18.682±6.62 24.298±18.04 13.278±9.20 12.298±8.80 7.130±1.28 38.902±19.32 4.504±1.20 14.465±5.15 35.755±6.79 13.591±4.84
ENST00000447267 N/A N/A N/A N/A N/A N/A N/A 4.799±0.00 N/A N/A N/A N/A N/A 6.283±0.00
ENST00000519115 N/A N/A N/A 7.408±0.00 9.582±0.00 N/A N/A 8.882±0.00 N/A 25.903±0.00 N/A N/A N/A N/A
ENST00000520168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.566±0.00
ENST00000522243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522843 N/A N/A 3.915±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523441 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000167912 ENST00000517898 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A 0.054±0.00 N/A N/A 0.690±0.51 N/A N/A
ENST00000518993 N/A 0.890±0.00 N/A N/A N/A 2.328±0.00 N/A 0.935±0.00 0.090±0.00 0.680±0.00 N/A N/A N/A N/A
ENST00000523683 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198846 ENST00000361421 0.211±0.00 1.416±0.00 0.249±0.00 4.467±2.21 0.412±0.00 3.149±1.46 0.140±0.03 0.604±0.59 0.322±0.25 1.159±0.53 0.016±0.00 0.743±0.47 0.876±0.31 1.885±0.10
ENSG00000242970 ENST00000482895 N/A 0.057±0.00 N/A 0.061±0.00 0.245±0.00 N/A N/A 0.059±0.00 0.052±0.00 0.055±0.00 N/A 0.123±0.00 0.121±0.00 0.123±0.00
ENSG00000254048 ENST00000518011 N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A N/A N/A 0.671±0.00 N/A 0.200±0.06
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028245 ENSMUST00000029910 11.441±3.61 10.962±2.23 20.144±3.08 10.839±2.18 15.630±1.41 7.669±1.65 11.045±1.97 9.002±0.48 10.822±7.76 15.237±1.41 10.901±2.63 22.434±2.79 9.794±0.80 3.016±0.92
ENSMUST00000124344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143983 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149015 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.947±0.00
ENSMUST00000156078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156283 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000041272 ENSMUST00000039987 1.062±0.67 1.013±0.42 0.186±0.04 6.130±4.06 3.857±0.94 3.286±2.68 0.201±0.00 0.635±0.11 1.172±1.21 0.878±0.28 0.020±0.01 2.274±0.92 0.048±0.02 1.268±0.33
ENSMUST00000125974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00 N/A N/A 3.251±0.51
ENSMUST00000147657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.013±0.00 N/A N/A N/A
ENSMUST00000150082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081388 ENSMUST00000117807 N/A N/A N/A N/A N/A 0.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083023 ENSMUST00000121663 N/A N/A N/A 0.022±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086052 ENSMUST00000137749 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.09 5.402±0.48

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