C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: metadherin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519934 MTDH-002 ENSG00000147649 9606 + 8:97644546-97725243 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000519934
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000519934 9.562±0.00 7.640±0.00 7.394±1.38 8.787±0.01 8.381±1.11 5.362±1.95 8.996±0.89 8.008±0.13 9.064±0.06 4.600±1.16 8.252±2.09 2.536±0.57 6.790±2.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001L2 CIL_0001L2_0001 CGP 8:97273474-97728770
CIL_0001KW CIL_0001KW_0001 CGP 8:97644179-97853013

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005783 IDA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022865 Mtdh-001 protein_coding Mus_musculus 0 1471
ENSMUST00000163333 Mtdh-005 protein_coding Mus_musculus 0 1450
ENSMUST00000171711 Mtdh-004 processed_transcript Mus_musculus 0 1251
ENSMUST00000172083 Mtdh-007 processed_transcript Mus_musculus 0 802
ENSMUST00000163697 Mtdh-003 retained_intron Mus_musculus 0 665
ENSMUST00000170050 Mtdh-008 protein_coding Mus_musculus 0 654
ENSMUST00000168991 Mtdh-010 nonsense_mediated_decay Mus_musculus 0 508
ENSMUST00000172082 Mtdh-002 retained_intron Mus_musculus 0 507
ENSMUST00000169905 Mtdh-006 protein_coding Mus_musculus 0 451
ENSMUST00000170553 Mtdh-009 protein_coding Mus_musculus 0 394

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