C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0001L2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000180543-ENSG00000147649 CGP 9606 8:97273474-97728770
GeneTranscriptPositionBiotype
ENSG00000147649 (MTDH)
metadherin
ENST00000336273 (MTDH-001) 97644179-97728770 protein_coding
ENST00000519293 (MTDH-004) 97691019-97724652 nonsense_mediated_decay
ENST00000519934 (MTDH-002) 97644546-97725243 protein_coding
ENST00000521933 (MTDH-006) 97691131-97724617 protein_coding
ENST00000522104 (MTDH-005) 97706412-97719087 retained_intron
ENST00000522313 (MTDH-003) 97644793-97691164 protein_coding
ENSG00000180543 (TSPYL5)
TSPY-like 5
ENST00000322128 (TSPYL5-001) 97273474-97277964 protein_coding
ENSG00000207215 (U3)
Small nucleolar RNA U3
ENST00000384486 (U3.1-219) 97358265-97358478 snoRNA
ENSG00000213750 (KB-1683C8.1)
ENST00000492365 (KB-1683C8.1-001) 97624203-97625079 processed_pseudogene
CIL_0001L2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038984-ENSMUSG00000022255 CGP 10090 15:33683876-34142386
GeneTranscriptPositionBiotype
ENSMUSG00000022255 (Mtdh)
metadherin
ENSMUST00000022865 (Mtdh-001) 34082719-34142386 protein_coding
ENSMUST00000163333 (Mtdh-005) 34083308-34136780 protein_coding
ENSMUST00000163697 (Mtdh-003) 34082725-34124352 retained_intron
ENSMUST00000168991 (Mtdh-010) 34083036-34134344 nonsense_mediated_decay
ENSMUST00000169905 (Mtdh-006) 34114942-34140710 protein_coding
ENSMUST00000170050 (Mtdh-008) 34083319-34136811 protein_coding
ENSMUST00000170553 (Mtdh-009) 34083322-34123750 protein_coding
ENSMUST00000171711 (Mtdh-004) 34133490-34141283 processed_transcript
ENSMUST00000172082 (Mtdh-002) 34082694-34103345 retained_intron
ENSMUST00000172083 (Mtdh-007) 34083853-34117997 processed_transcript
ENSMUSG00000038984 (Tspyl5)
testis-specific protein, Y-encoded-like 5
ENSMUST00000042021 (Tspyl5-201) 33683876-33687883 protein_coding
ENSMUSG00000089072 (Gm24500)
predicted gene, 24500
ENSMUST00000158447 (Gm24500-201) 34139253-34139376 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001L2_0001ENSG00000147649ENST00000336273ENST00000519293ENST00000519934ENST00000521933ENST00000522104ENST00000522313ENSG00000180543ENST00000322128ENSG00000207215ENST00000384486ENSG00000213750ENST00000492365CIL_0001L2_0002ENSMUSG00000022255ENSMUST00000022865ENSMUST00000163333ENSMUST00000163697ENSMUST00000168991ENSMUST00000169905ENSMUST00000170050ENSMUST00000170553ENSMUST00000171711ENSMUST00000172082ENSMUST00000172083ENSMUSG00000038984ENSMUST00000042021ENSMUSG00000089072ENSMUST00000158447
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001L2_0001ENSG00000147649ENST00000336273ENST00000519934ENST00000522313ENSG00000180543ENST00000322128ENSG00000207215ENST00000384486ENSG00000213750ENST00000492365CIL_0001L2_0002ENSMUSG00000022255ENSMUST00000022865ENSMUST00000163333ENSMUST00000163697ENSMUST00000168991ENSMUST00000169905ENSMUST00000170050ENSMUST00000170553ENSMUST00000171711ENSMUST00000172082ENSMUSG00000038984ENSMUST00000042021ENSMUSG00000089072ENSMUST00000158447
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147649 ENST00000336273 8.080±0.00 8.122±0.00 3.175±0.00 5.899±0.43 9.045±0.44 7.986±0.22 4.103±1.04 8.170±0.60 8.210±0.21 7.427±1.67 5.043±3.26 10.946±2.49 3.569±1.07 7.064±1.55
ENST00000519293 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519934 9.562±0.00 N/A 7.640±0.00 7.394±1.38 8.787±0.01 8.381±1.11 5.362±1.95 8.996±0.89 8.008±0.13 9.064±0.06 4.600±1.16 8.252±2.09 2.536±0.57 6.790±2.52
ENST00000521933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.360±0.00 7.563±0.00 15.684±0.00
ENSG00000180543 ENST00000322128 2.648±0.00 5.028±0.00 1.067±0.00 7.148±2.75 3.971±2.13 2.596±1.46 3.168±1.74 4.043±3.73 2.148±1.39 1.978±0.36 1.615±0.41 7.712±7.53 2.189±0.27 27.674±9.43
ENSG00000207215 ENST00000384486 N/A N/A N/A N/A N/A N/A N/A N/A 0.606±0.00 N/A N/A N/A N/A 0.281±0.00
ENSG00000213750 ENST00000492365 0.693±0.00 0.464±0.00 N/A 0.102±0.00 0.193±0.00 0.628±0.00 0.053±0.00 0.092±0.00 0.263±0.00 0.266±0.00 0.250±0.00 0.064±0.00 0.058±0.00 0.224±0.10
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022255 ENSMUST00000022865 8.528±3.11 9.434±5.35 18.656±1.48 11.695±0.50 14.475±6.49 12.429±2.91 4.488±0.00 4.272±1.98 8.097±3.86 10.443±3.60 15.052±4.85 5.820±1.75 11.760±5.89 13.849±1.39
ENSMUST00000163333 N/A N/A N/A 9.160±0.00 N/A N/A N/A N/A N/A N/A N/A 12.385±0.00 12.247±0.00 42.115±0.00
ENSMUST00000163697 N/A N/A N/A 2.472±0.04 N/A N/A N/A N/A 1.045±0.00 N/A N/A 2.614±0.43 N/A N/A
ENSMUST00000168991 N/A N/A N/A N/A 8.492±0.00 N/A N/A N/A N/A N/A N/A 18.211±0.00 25.704±1.38 25.029±0.00
ENSMUST00000169905 N/A N/A N/A N/A 5.580±0.00 N/A 4.556±0.00 N/A N/A N/A N/A N/A N/A 18.087±1.37
ENSMUST00000170050 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.179±0.00 N/A N/A
ENSMUST00000170553 N/A N/A N/A 22.604±0.00 N/A N/A N/A N/A N/A N/A N/A 22.473±0.00 29.698±3.08 41.271±0.00
ENSMUST00000171711 N/A N/A N/A 13.620±0.00 N/A N/A N/A N/A N/A N/A N/A 16.972±0.00 22.031±6.76 20.089±8.17
ENSMUST00000172082 N/A 4.846±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038984 ENSMUST00000042021 1.051±0.53 1.590±0.24 1.398±0.15 4.721±0.69 0.446±0.09 0.431±0.05 1.266±0.05 0.902±0.09 0.145±0.14 0.715±0.07 0.151±0.03 2.174±0.71 0.138±0.12 3.502±1.54
ENSMUSG00000089072 ENSMUST00000158447 N/A N/A N/A N/A 1800.380±0.00 N/A N/A N/A 14.655±0.00 N/A N/A 27.640±0.00 11.540±0.00 N/A

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