C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: secreted protein, acidic, cysteine-rich (osteonectin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520687 SPARC-002 ENSG00000113140 9606 - 5:151662488-151667654 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000520687
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000520687 397.457±0.00 208.181±0.00 11.724±0.00 129.476±0.00 840.924±781.53 173.208±161.60 119.367±0.00 259.317±0.00 53.910±0.00 289.576±263.30 29.152±12.48 413.626±302.70 1320.976±890.89 445.485±60.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025X CIL_00025X_0001 CGP 5:151504093-151687165
CIL_0007IC CIL_0007IC_0002 CGP 5:151661096-151772532

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123775 Sparc-006 processed_transcript Mus_musculus 0 689
ENSMUST00000108858 Sparc-002 protein_coding Mus_musculus 0 680
ENSMUST00000018737 Sparc-001 protein_coding Mus_musculus 0 680
ENSMUST00000130642 Sparc-005 processed_transcript Mus_musculus 0 593

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