C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000523711 ARHGEF10-005 ENSG00000104728 9606 + 8:1876051-1927513 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonLungENST00000523711
Transcript ID Bladder Colon Lung
ENST00000523711 0.342±0.00 0.326±0.00 1.109±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GL CIL_0007GL_0002 CGP 8:1755778-1958641
CIL_0000LF CIL_0000LF_0001 CGP 8:1823976-2006936

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110800 Arhgef10-002 protein_coding Mus_musculus 0 1646
ENSMUST00000084207 Arhgef10-001 protein_coding Mus_musculus 0 1471
ENSMUST00000163062 Arhgef10-007 protein_coding Mus_musculus 0 1384
ENSMUST00000161162 Arhgef10-003 protein_coding Mus_musculus 0 743

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