C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho guanine nucleotide exchange factor (GEF) 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110800 Arhgef10-002 ENSMUSG00000071176 10090 + 8:14911738-15001085 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110800
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110800 8.271±2.37 2.974±0.98 4.606±0.17 3.248±1.56 6.124±1.86 2.931±0.97 2.465±0.86 1.038±0.32 0.515±0.20 6.986±1.25 0.476±0.25 5.932±2.26 4.931±2.17 2.626±1.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GL CIL_0007GL_0003 CGP 8:14881335-15001085
CIL_0000LF CIL_0000LF_0002 CGP 8:14911663-15033333

Gene Ontology

GO IDEvidence TypeGO Description
GO:0032321 IEA positive regulation of Rho GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111966 arhgef10lb-201 protein_coding Danio_rerio 8.99999e-40 171
ENSDART00000134741 arhgef10lb-001 protein_coding Danio_rerio 8.99999e-40 171
ENST00000349830 ARHGEF10-003 protein_coding Homo_sapiens 0 2228
ENST00000398560 ARHGEF10-201 protein_coding Homo_sapiens 0 1264
ENST00000398564 ARHGEF10-202 protein_coding Homo_sapiens 0 2228
ENST00000518288 ARHGEF10-001 protein_coding Homo_sapiens 0 2224
ENST00000520359 ARHGEF10-002 protein_coding Homo_sapiens 0 2706
ENST00000520972 ARHGEF10-006 retained_intron Homo_sapiens 0 1264
ENST00000522435 ARHGEF10-004 protein_coding Homo_sapiens 0 1389
ENST00000523711 ARHGEF10-005 retained_intron Homo_sapiens 0 1646
ENST00000610399 ARHGEF10-203 protein_coding Homo_sapiens 0 2228
ENST00000616718 ARHGEF10-204 protein_coding Homo_sapiens 0 1264
ENST00000619613 ARHGEF10-205 protein_coding Homo_sapiens 0 2228

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