| Transcript ID | Muscle |
|---|---|
| ENST00000526754 | 2.723±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | RNA binding motif protein 25 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000526754  |
RBM25-006 |
ENSG00000119707 |
9606 | + |
14:73058549-73101179  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008P0 | CIL_0008P0_0001 | VISTA | 14:72878760-73482269 |
| CIL_0001TO | CIL_0001TO_0001 | CGP | 14:72969451-73123898 |
| CIL_0003OW | CIL_0003OW_0001 | CGP | 14:73058436-73223691 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0000381 | IDA | regulation of alternative mRNA splicing, via spliceosome |
| GO:0003676 | IEA | nucleic acid binding |
| GO:0003729 | IDA | mRNA binding |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IDA | nucleus |
| GO:0005681 | IBA | spliceosomal complex |
| GO:0005737 | IEA | cytoplasm |
| GO:0006397 | IEA | mRNA processing |
| GO:0008380 | IEA | RNA splicing |
| GO:0016607 | IDA | nuclear speck |
| GO:0042981 | IDA | regulation of apoptotic process |
| GO:0044822 | IDA | poly(A) RNA binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000048155
|
Rbm25-002 | protein_coding | Mus_musculus | 0 | 1301 |
|
ENSMUST00000181983
|
Rbm25-003 | protein_coding | Mus_musculus | 0 | 1184 |
|
ENSMUST00000182255
|
Rbm25-004 | retained_intron | Mus_musculus | 0 | 1086 |
|
ENSMUST00000182036
|
Rbm25-009 | protein_coding | Mus_musculus | 0 | 789 |
|
ENSMUST00000183128
|
Rbm25-013 | retained_intron | Mus_musculus | 0 | 662 |
|
ENSMUST00000182633
|
Rbm25-010 | nonsense_mediated_decay | Mus_musculus | 0 | 652 |
|
ENSMUST00000182618
|
Rbm25-012 | protein_coding | Mus_musculus | 0 | 634 |
|
ENSMUST00000183039
|
Rbm25-021 | processed_transcript | Mus_musculus | 0 | 444 |
|
ENSMUST00000182450
|
Rbm25-020 | nonsense_mediated_decay | Mus_musculus | 0 | 444 |
|
ENSMUST00000183154
|
Rbm25-008 | protein_coding | Mus_musculus | 0 | 366 |
|
ENSMUST00000182004
|
Rbm25-007 | protein_coding | Mus_musculus | 0 | 364 |
|
ENSMUST00000182032
|
Rbm25-005 | retained_intron | Mus_musculus | 0 | 207 |
|
ENSMUST00000182347
|
Rbm25-011 | protein_coding | Mus_musculus | 1e-19 | 102 |
