C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000527791 RPS25-003 ENSG00000118181 9606 - 11:119015712-119018678 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyMuscleOvaryENST00000527791
Transcript ID Brain Breast Colon Kidney Muscle Ovary
ENST00000527791 31.909±0.00 43.188±0.00 42.331±0.00 36.638±0.00 65.800±0.00 50.068±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021U CIL_00021U_0002 CGP 11:118971707-119015791

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080300 Rps25-201 protein_coding Mus_musculus 0 324
ENSMUST00000119876 Rps25-ps1-001 processed_pseudogene Mus_musculus 0 252
ENSMUST00000072718 Gm4963-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000116078 Gm12643-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000137940 Gm16288-001 processed_pseudogene Mus_musculus 0 195

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