C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 170
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000528318 RNF170-002 ENSG00000120925 9606 - 8:42861330-42896723 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverENST00000528318
Transcript ID Bladder Breast Colon Heart Liver
ENST00000528318 1.756±0.00 1.339±0.00 1.938±0.00 0.988±0.00 1.793±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LW CIL_0005LW_0002 CGP 8:42849637-43030539

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000181188 RP23-174D7.1-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000014022 Rnf170-001 protein_coding Mus_musculus 0 523
ENSMUST00000153528 Rnf170-006 protein_coding Mus_musculus 0 433
ENSMUST00000124757 Rnf170-002 nonsense_mediated_decay Mus_musculus 3e-33 147

Loading