Transcript Info |
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Description: | SRY (sex determining region Y)-box 6 | |||||
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Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000528429 | SOX6-012 | ENSG00000110693 | 9606 | - | 11:15972708-16402863 | protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
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Region ID | Sub-Region | Region Type | Position |
CIL_0003ZR | CIL_0003ZR_0001 | CGP | 11:15112424-16739591 |
CIL_0007MN | CIL_0007MN_0001 | UCNEbase | 11:15367929-16420508 |
CIL_0007RU | CIL_0007RU_0001 | VISTA | 11:15810326-16413523 |
CIL_0008U3 | CIL_0008U3_0001 | VISTA | 11:15869319-16470907 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000981 | IEA | sequence-specific DNA binding RNA polymerase II transcription factor activity |
GO:0003677 | NAS | DNA binding |
GO:0003700 | NAS | sequence-specific DNA binding transcription factor activity |
GO:0005515 | IPI | protein binding |
GO:0005634 | IEA:IDA | nucleus |
GO:0006351 | IEA | transcription, DNA-templated |
GO:0006355 | NAS | regulation of transcription, DNA-templated |
GO:0006366 | IEA | transcription from RNA polymerase II promoter |
GO:0007517 | NAS | muscle organ development |
GO:0032332 | IDA | positive regulation of chondrocyte differentiation |
GO:0061036 | IDA | positive regulation of cartilage development |
GO:0071560 | IDA | cellular response to transforming growth factor beta stimulus |
GO:2000741 | IDA | positive regulation of mesenchymal stem cell differentiation |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000166207 | Sox6-203 | protein_coding | Mus_musculus | 0 | 3742 |
ENSMUST00000072804 | Sox6-201 | protein_coding | Mus_musculus | 0 | 3738 |
ENSMUST00000169129 | Sox6-205 | protein_coding | Mus_musculus | 0 | 2015 |
ENSMUST00000166877 | Sox6-204 | protein_coding | Mus_musculus | 0 | 2015 |
ENSMUST00000106612 | Sox6-202 | protein_coding | Mus_musculus | 0 | 2008 |
ENSDART00000100998 | sox6-201 | protein_coding | Danio_rerio | 0 | 693 |
ENSDART00000150068 | sox6-001 | protein_coding | Danio_rerio | 0 | 693 |
ENSDART00000006737 | sox5-201 | protein_coding | Danio_rerio | 0 | 272 |
ENSDART00000134595 | sox5-001 | protein_coding | Danio_rerio | 0 | 272 |
ENSDART00000150225 | sox6-002 | retained_intron | Danio_rerio | 0 | 257 |