C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 2495
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000191160 RP23-298I7.3-001 ENSMUSG00000101357 10090 - 9:92612512-92612977 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartOvaryPlacentaTestisENSMUST00000191160
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Ovary Placenta Testis
ENSMUST00000191160 0.318±0.01 0.156±0.06 0.025±0.00 0.060±0.02 0.159±0.00 0.081±0.00 0.413±0.30 0.045±0.00 0.314±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005X5 CIL_0005X5_0002 CGP 9:92542223-94538081

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000244520 SNRPC-001 protein_coding Homo_sapiens 0 375
ENST00000374017 SNRPC-002 protein_coding Homo_sapiens 0 374
ENST00000374018 SNRPC-003 protein_coding Homo_sapiens 0 350
ENST00000417250 SNRPCP9-001 processed_pseudogene Homo_sapiens 4.2039e-45 183
ENST00000474635 SNRPC-004 processed_transcript Homo_sapiens 0 281
ENST00000481033 SNRPCP10-001 processed_pseudogene Homo_sapiens 9.00054e-42 172
ENST00000504370 SNRPCP2-001 processed_pseudogene Homo_sapiens 0 315
ENST00000514820 SNRPCP8-001 processed_pseudogene Homo_sapiens 4.00001e-40 167
ENST00000524498 SNRPCP14-001 processed_pseudogene Homo_sapiens 1e-39 165
ENST00000531775 SNRPCP5-001 processed_pseudogene Homo_sapiens 1e-35 152
ENST00000622868 RP11-90D4.4-001 processed_pseudogene Homo_sapiens 9.00054e-42 172

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