C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S25
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000532567 RPS25-005 ENSG00000118181 9606 - 11:119015712-119018330 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonKidneyOvaryENST00000532567
Transcript ID Adrenal Colon Kidney Ovary
ENST00000532567 226.814±0.00 242.645±0.00 198.282±0.00 270.949±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00021U CIL_00021U_0002 CGP 11:118971707-119015791

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080300 Rps25-201 protein_coding Mus_musculus 0 435
ENSMUST00000119876 Rps25-ps1-001 processed_pseudogene Mus_musculus 0 357
ENSMUST00000116078 Gm12643-001 processed_pseudogene Mus_musculus 0 322
ENSMUST00000072718 Gm4963-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000137940 Gm16288-001 processed_pseudogene Mus_musculus 0 289

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