C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: peripherin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000533401 PRPH-006 ENSG00000135406 9606 + 12:49295751-49297424 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonTestisENST00000533401
Transcript ID Colon Testis
ENST00000533401 0.670±0.00 13.118±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009R CIL_00009R_0001 CGP 12:49188736-49298686
CIL_00009Q CIL_00009Q_0001 CGP 12:49293252-49331731

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000024249 Prph-201 protein_coding Mus_musculus 0 647
ENSMUST00000047104 Prph-202 protein_coding Mus_musculus 0 420
ENSDART00000121861 prph-201 protein_coding Danio_rerio 0 202
ENSDART00000154314 prph-001 protein_coding Danio_rerio 0 202

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