C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein S13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000534329 RPS13-003 ENSG00000110700 9606 - 11:17076825-17077715 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000836 CIL_000836_0001 VISTA 11:16591589-17196198
CIL_0003ZX CIL_0003ZX_0001 CGP 11:16778295-17077787
CIL_0003ZW CIL_0003ZW_0001 CGP 11:17074389-17207983

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000170953 Rps13-201 protein_coding Mus_musculus 0 228
ENSMUST00000183478 Rps13-ps1-001 processed_pseudogene Mus_musculus 0 207
ENSMUST00000182017 Rps13-ps2-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000120338 Gm15483-001 processed_pseudogene Mus_musculus 2.00386e-43 180
ENSMUST00000117927 Rps13-ps4-001 processed_pseudogene Mus_musculus 2.00386e-43 180
ENSMUST00000118906 Rps13-ps8-001 processed_pseudogene Mus_musculus 0.0000002 60

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