C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | spalt-like transcription factor 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000536229  |
SALL3-006 |
ENSG00000256463 |
9606 | + |
18:78991682-78997322  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000018 | CIL_000018_0002 | CGP | 18:77250549-79002677 |
| CIL_0007MA | CIL_0007MA_0003 | UCNEbase | 18:78027502-79284092 |
| CIL_0007YX | CIL_0007YX_0001 | VISTA | 18:78401276-79002723 |
| CIL_0008XA | CIL_0008XA_0001 | VISTA | 18:78421722-79023257 |
| CIL_00094I | CIL_00094I_0001 | VISTA | 18:78457730-79058836 |
| CIL_0008KF | CIL_0008KF_0001 | VISTA | 18:78942193-79542977 |
| CIL_0008IX | CIL_0008IX_0001 | VISTA | 18:78950009-79550795 |
| CIL_000015 | CIL_000015_0002 | CGP | 18:78980275-79378283 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0005634 | IEA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0046872 | IEA | metal ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000057950
|
Sall3-201 | protein_coding | Mus_musculus | 0 | 2475 |
|
ENSMUST00000034090
|
Sall1-201 | protein_coding | Mus_musculus | 0 | 291 |
|
ENSDART00000111842
|
sall1a-001 | protein_coding | Danio_rerio | 0 | 246 |
