C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: activating transcription factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538946 ATF2-202 ENSG00000115966 9606 - 2:175074288-175114812 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderMuscleTestisENST00000538946
Transcript ID Bladder Muscle Testis
ENST00000538946 3.554±0.00 2.993±0.00 8.953±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HB CIL_0001HB_0001 CGP 2:174799363-175168382
CIL_0001H6 CIL_0001H6_0001 CGP 2:175072250-175184607

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000112017 Atf2-202 protein_coding Mus_musculus 0 1845
ENSMUST00000100009 Atf2-201 protein_coding Mus_musculus 0 1845
ENSMUST00000112007 Atf2-002 protein_coding Mus_musculus 0 1845
ENSMUST00000055833 Atf2-005 protein_coding Mus_musculus 0 1845
ENSMUST00000090802 Atf2-006 protein_coding Mus_musculus 0 1845
ENSMUST00000112010 Atf2-008 protein_coding Mus_musculus 0 1845
ENSMUST00000156455 Atf2-007 processed_transcript Mus_musculus 0 1509
ENSMUST00000112016 Atf2-001 protein_coding Mus_musculus 0 1509
ENSMUST00000143714 Atf2-004 processed_transcript Mus_musculus 0 977
ENSMUST00000173010 Atf2-017 nonsense_mediated_decay Mus_musculus 0 977
ENSMUST00000124737 Atf2-015 protein_coding Mus_musculus 0 761
ENSMUST00000154456 Atf2-016 protein_coding Mus_musculus 0 335
ENSMUST00000141050 Atf2-003 processed_transcript Mus_musculus 0 335
ENSMUST00000128531 Atf2-011 protein_coding Mus_musculus 0 333
ENSMUST00000136958 Atf2-013 protein_coding Mus_musculus 0 322
ENSMUST00000129555 Atf2-014 processed_transcript Mus_musculus 6e-31 139

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