C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SRY (sex determining region Y)-box 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542241 SOX5-012 ENSG00000134532 9606 - 12:23575659-23632194 processed_transcript

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006Y0 CIL_0006Y0_0002 CGP 12:22625075-23951032
CIL_0007NR CIL_0007NR_0001 UCNEbase 12:22767069-24538480
CIL_0004XB CIL_0004XB_0001 CGP 12:23529500-24949459

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144289 Sox5-013 protein_coding Mus_musculus 0 499
ENSMUST00000038815 Sox5-001 protein_coding Mus_musculus 0 499
ENSMUST00000170367 Sox5-201 protein_coding Mus_musculus 0 274
ENSMUST00000141102 Sox5-009 retained_intron Mus_musculus 0 274
ENSMUST00000124233 Sox5-010 protein_coding Mus_musculus 0 274
ENSMUST00000111746 Sox5-004 processed_transcript Mus_musculus 0 274
ENSMUST00000111749 Sox5-005 protein_coding Mus_musculus 0 274
ENSMUST00000077160 Sox5-002 protein_coding Mus_musculus 0 274
ENSMUST00000111748 Sox5-003 protein_coding Mus_musculus 0 274
ENSMUST00000129050 Sox5-007 retained_intron Mus_musculus 0 231

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