C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neighbor of BRCA1 gene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000542611 NBR1-002 ENSG00000188554 9606 + 17:43171202-43209993 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00040M CIL_00040M_0001 CGP 17:43044295-43211689
CIL_0000KX CIL_0000KX_0002 CGP 17:43170481-43220041

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107212 Nbr1-015 protein_coding Mus_musculus 0 2418
ENSMUST00000107218 Nbr1-202 protein_coding Mus_musculus 0 2073
ENSMUST00000107208 Nbr1-005 protein_coding Mus_musculus 0 2073
ENSMUST00000123558 Nbr1-004 nonsense_mediated_decay Mus_musculus 0 2073
ENSMUST00000103098 Nbr1-002 protein_coding Mus_musculus 0 2073
ENSMUST00000103099 Nbr1-001 protein_coding Mus_musculus 0 2073
ENSMUST00000071537 Nbr1-201 protein_coding Mus_musculus 0 2047
ENSMUST00000107213 Nbr1-003 protein_coding Mus_musculus 0 1718
ENSMUST00000149019 Nbr1-006 protein_coding Mus_musculus 0 1498
ENSMUST00000174013 Nbr1-017 retained_intron Mus_musculus 0 475
ENSMUST00000127871 Nbr1-009 retained_intron Mus_musculus 0 455
ENSMUST00000148805 Nbr1-012 retained_intron Mus_musculus 0 372
ENSMUST00000172744 Nbr1-018 retained_intron Mus_musculus 0 361
ENSMUST00000146452 Nbr1-008 retained_intron Mus_musculus 0 289
ENSMUST00000144517 Nbr1-011 processed_transcript Mus_musculus 0 209
ENSMUST00000127421 Nbr1-016 protein_coding Mus_musculus 9.99967e-42 176
ENSMUST00000147239 Nbr1-014 protein_coding Mus_musculus 9.99967e-42 176
ENSMUST00000136185 Nbr1-007 nonsense_mediated_decay Mus_musculus 5e-40 171
ENSMUST00000141170 Nbr1-013 retained_intron Mus_musculus 6e-29 134

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