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C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | neighbor of BRCA1 gene 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000542611  |
NBR1-002 |
ENSG00000188554 |
9606 | + |
17:43171202-43209993  |
protein_coding |
|
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Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00040M | CIL_00040M_0001 | CGP | 17:43044295-43211689 |
| CIL_0000KX | CIL_0000KX_0002 | CGP | 17:43170481-43220041 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0008270 | IEA | zinc ion binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000107212
|
Nbr1-015 | protein_coding | Mus_musculus | 0 | 2418 |
|
ENSMUST00000107218
|
Nbr1-202 | protein_coding | Mus_musculus | 0 | 2073 |
|
ENSMUST00000107208
|
Nbr1-005 | protein_coding | Mus_musculus | 0 | 2073 |
|
ENSMUST00000123558
|
Nbr1-004 | nonsense_mediated_decay | Mus_musculus | 0 | 2073 |
|
ENSMUST00000103098
|
Nbr1-002 | protein_coding | Mus_musculus | 0 | 2073 |
|
ENSMUST00000103099
|
Nbr1-001 | protein_coding | Mus_musculus | 0 | 2073 |
|
ENSMUST00000071537
|
Nbr1-201 | protein_coding | Mus_musculus | 0 | 2047 |
|
ENSMUST00000107213
|
Nbr1-003 | protein_coding | Mus_musculus | 0 | 1718 |
|
ENSMUST00000149019
|
Nbr1-006 | protein_coding | Mus_musculus | 0 | 1498 |
|
ENSMUST00000174013
|
Nbr1-017 | retained_intron | Mus_musculus | 0 | 475 |
|
ENSMUST00000127871
|
Nbr1-009 | retained_intron | Mus_musculus | 0 | 455 |
|
ENSMUST00000148805
|
Nbr1-012 | retained_intron | Mus_musculus | 0 | 372 |
|
ENSMUST00000172744
|
Nbr1-018 | retained_intron | Mus_musculus | 0 | 361 |
|
ENSMUST00000146452
|
Nbr1-008 | retained_intron | Mus_musculus | 0 | 289 |
|
ENSMUST00000144517
|
Nbr1-011 | processed_transcript | Mus_musculus | 0 | 209 |
|
ENSMUST00000127421
|
Nbr1-016 | protein_coding | Mus_musculus | 9.99967e-42 | 176 |
|
ENSMUST00000147239
|
Nbr1-014 | protein_coding | Mus_musculus | 9.99967e-42 | 176 |
|
ENSMUST00000136185
|
Nbr1-007 | nonsense_mediated_decay | Mus_musculus | 5e-40 | 171 |
|
ENSMUST00000141170
|
Nbr1-013 | retained_intron | Mus_musculus | 6e-29 | 134 |
