C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000546900 KRT8-017 ENSG00000170421 9606 - 12:52900588-52903648 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENST00000546900
Transcript ID Brain Muscle
ENST00000546900 0.117±0.00 0.651±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00038V CIL_00038V_0001 CGP 12:52837804-52949954
CIL_0006T8 CIL_0006T8_0001 CGP 12:52897187-52952901

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 505
ENSMUST00000068904 Krt7-001 protein_coding Mus_musculus 4e-19 99
ENSMUST00000147662 Krt7-003 protein_coding Mus_musculus 4e-19 99
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 2e-17 94
ENSMUST00000131069 Krt7-002 retained_intron Mus_musculus 0.00000000000001 84
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.00003 53

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