C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromobox homolog 3 pseudogene 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000552017 CBX3P5-001 ENSG00000257666 9606 - 12:95286318-95286838 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartTestisENST00000552017
Transcript ID Adipose Breast Heart Testis
ENST00000552017 0.161±0.00 0.111±0.07 0.037±0.00 0.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Y0 CIL_0000Y0_0002 CGP 12:95076749-95302790
CIL_0000Y1 CIL_0000Y1_0002 CGP 12:95217746-95515839

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081455 Gm10068-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000114446 Cbx3-005 protein_coding Mus_musculus 0 544
ENSMUST00000031862 Cbx3-002 protein_coding Mus_musculus 0 544
ENSMUST00000094623 Cbx3-001 protein_coding Mus_musculus 0 544
ENSMUST00000181108 Gm6984-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000120402 Gm13118-001 processed_pseudogene Mus_musculus 0 514
ENSMUST00000091531 Gm5196-201 processed_pseudogene Mus_musculus 0 477
ENSMUST00000091545 Gm6901-201 processed_pseudogene Mus_musculus 0 468
ENSMUST00000099421 Gm5792-201 processed_pseudogene Mus_musculus 0 462
ENSMUST00000091539 Gm6917-201 processed_pseudogene Mus_musculus 0 460
ENSMUST00000118595 Cbx3-ps3-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000141711 Cbx3-007 protein_coding Mus_musculus 0 394
ENSMUST00000188772 Als2cr12-002 protein_coding Mus_musculus 0 307
ENSMUST00000114445 Cbx3-004 protein_coding Mus_musculus 4.06377e-44 182

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