C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: keratin 86
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553310 KRT86-002 ENSG00000170442 9606 + 12:52249300-52303159 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonENST00000553310
Transcript ID Colon
ENST00000553310 0.426±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TB CIL_0006TB_0001 CGP 12:52168996-52252186
CIL_00033Q CIL_00033Q_0004 CGP 12:52232520-52309163
CIL_00033Q CIL_00033Q_0009 CGP 12:52249300-52309163

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088049 Krt86-201 protein_coding Mus_musculus 0 494
ENSMUST00000061185 Krt81-201 protein_coding Mus_musculus 0 488
ENSMUST00000081945 Krt83-201 protein_coding Mus_musculus 0 479
ENSMUST00000023718 5430421N21Rik-001 protein_coding Mus_musculus 0 457
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 9e-31 137
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 4e-24 115
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.000000005 66

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