C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FCF1 rRNA-processing protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000554973 FCF1-010 ENSG00000119616 9606 + 14:74715672-74732793 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderENST00000554973
Transcript ID Bladder
ENST00000554973 1.217±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AZ CIL_0005AZ_0001 CGP 14:74653437-74738620
CIL_0005AX CIL_0005AX_0001 CGP 14:74713144-74859435

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000171040 Fcf1-002 protein_coding Mus_musculus 0 364
ENSMUST00000021669 Fcf1-001 protein_coding Mus_musculus 0 364
ENSMUST00000117230 Gm11221-001 processed_pseudogene Mus_musculus 0 353

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