C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005AX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119616-ENSG00000119596 CGP 9606 14:74713144-74859435
GeneTranscriptPositionBiotype
ENSG00000119596 (YLPM1)
YLP motif containing 1 		ENST00000325680 (YLPM1-001) 74763366-74836281 protein_coding
ENST00000546901 (YLPM1-006) 74818309-74828032 processed_transcript
ENST00000547879 (YLPM1-003) 74809632-74822115 protein_coding
ENST00000549197 (YLPM1-005) 74834898-74837309 retained_intron
ENST00000549293 (YLPM1-002) 74781385-74836190 nonsense_mediated_decay
ENST00000550021 (YLPM1-007) 74823978-74829289 retained_intron
ENST00000552421 (YLPM1-008) 74763366-74836190 protein_coding
ENST00000553381 (YLPM1-011) 74844024-74855675 processed_transcript
ENST00000554107 (YLPM1-010) 74817238-74859435 protein_coding
ENSG00000119616 (FCF1)
FCF1 rRNA-processing protein 		ENST00000341162 (FCF1-001) 74713144-74738620 protein_coding
ENST00000534938 (FCF1-007) 74713170-74735040 protein_coding
ENST00000553615 (FCF1-003) 74713170-74735304 protein_coding
ENST00000553673 (FCF1-009) 74713204-74723343 nonsense_mediated_decay
ENST00000554064 (FCF1-008) 74713170-74732812 nonsense_mediated_decay
ENST00000554590 (FCF1-002) 74713144-74732817 protein_coding
ENST00000554973 (FCF1-010) 74715672-74732793 retained_intron
ENST00000556814 (FCF1-006) 74713168-74734917 nonsense_mediated_decay
CIL_0005AX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021243-ENSMUSG00000021244 CGP 10090 12:84970897-85070515
GeneTranscriptPositionBiotype
ENSMUSG00000021243 (Fcf1)
FCF1 small subunit (SSU) processome component homolog (S. cerevisiae) 		ENSMUST00000021669 (Fcf1-001) 84970897-84983303 protein_coding
ENSMUST00000171040 (Fcf1-002) 84970981-84983291 protein_coding
ENSMUST00000172241 (Fcf1-003) 84980210-84983297 retained_intron
ENSMUSG00000021244 (Ylpm1)
YLP motif containing 1 		ENSMUST00000021670 (Ylpm1-001) 84996352-85070515 protein_coding
ENSMUST00000101202 (Ylpm1-201) 84996490-85070514 protein_coding
ENSMUST00000164558 (Ylpm1-002) 85014701-85070492 nonsense_mediated_decay
ENSMUST00000165803 (Ylpm1-007) 85049690-85050621 retained_intron
ENSMUST00000166605 (Ylpm1-005) 85064679-85070415 retained_intron
ENSMUST00000167838 (Ylpm1-006) 85059960-85070249 retained_intron
ENSMUST00000168977 (Ylpm1-004) 84996321-85070492 protein_coding
ENSMUST00000169150 (Ylpm1-003) 85042227-85059336 retained_intron
ENSMUSG00000042350 (Arel1)
apoptosis resistant E3 ubiquitin protein ligase 1 		ENSMUST00000043169 (Arel1-001) 84918150-84970900 protein_coding
ENSMUST00000163231 (Arel1-002) 84918148-84970824 nonsense_mediated_decay
ENSMUST00000163372 (Arel1-007) 84934319-84943378 nonsense_mediated_decay
ENSMUST00000165093 (Arel1-004) 84941761-84945398 protein_coding
ENSMUST00000165886 (Arel1-006) 84941791-84970838 protein_coding
ENSMUST00000167448 (Arel1-003) 84941782-84970856 protein_coding
ENSMUST00000168713 (Arel1-005) 84951082-84966030 processed_transcript
ENSMUST00000169161 (Arel1-008) 84940161-84946923 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AX_0001ENSG00000119596ENST00000325680ENST00000546901ENST00000547879ENST00000549197ENST00000549293ENST00000550021ENST00000552421ENST00000553381ENST00000554107ENSG00000119616ENST00000341162ENST00000534938ENST00000553615ENST00000553673ENST00000554064ENST00000554590ENST00000554973ENST00000556814CIL_0005AX_0002ENSMUSG00000021243ENSMUST00000021669ENSMUST00000171040ENSMUST00000172241ENSMUSG00000021244ENSMUST00000021670ENSMUST00000101202ENSMUST00000164558ENSMUST00000165803ENSMUST00000166605ENSMUST00000167838ENSMUST00000168977ENSMUST00000169150ENSMUSG00000042350ENSMUST00000043169ENSMUST00000163231ENSMUST00000163372ENSMUST00000165093ENSMUST00000165886ENSMUST00000167448ENSMUST00000168713ENSMUST00000169161
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005AX_0001ENSG00000119596ENST00000325680ENST00000547879ENST00000549293ENST00000552421ENST00000554107ENSG00000119616ENST00000341162ENST00000534938ENST00000553615ENST00000554973ENST00000556814CIL_0005AX_0002ENSMUSG00000021243ENSMUST00000021669ENSMUST00000171040ENSMUSG00000021244ENSMUST00000021670ENSMUST00000101202ENSMUST00000164558ENSMUST00000168977ENSMUSG00000042350ENSMUST00000043169ENSMUST00000163231
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119596 ENST00000325680 7.305±0.00 3.399±0.00 1.126±0.00 4.765±3.76 N/A 2.020±0.46 2.064±1.30 2.043±0.00 2.842±0.00 0.977±0.00 3.378±0.00 12.319±10.73 2.934±1.00 19.969±9.50
ENST00000546901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547879 N/A N/A N/A 2.556±0.00 5.420±0.00 4.425±0.00 N/A 1.027±0.00 N/A 4.140±0.00 0.957±0.00 N/A N/A N/A
ENST00000549197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549293 4.190±0.00 5.994±0.00 1.073±0.00 5.014±2.14 3.281±1.64 2.929±1.54 1.816±0.21 3.882±3.42 3.067±0.76 1.866±0.63 3.606±2.55 5.280±1.36 2.213±0.80 12.285±0.80
ENST00000550021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552421 N/A 3.739±0.00 2.048±0.00 3.797±0.00 N/A 3.296±0.00 0.997±0.27 2.931±1.20 2.168±0.47 1.552±0.20 1.625±0.93 3.667±1.18 3.627±2.74 5.065±0.00
ENST00000553381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554107 N/A N/A N/A N/A 2.514±0.00 N/A N/A N/A N/A 1.008±0.00 N/A 2.416±0.00 1.296±0.00 N/A
ENSG00000119616 ENST00000341162 N/A N/A 0.120±0.00 0.254±0.00 1.163±0.00 4.093±0.00 1.603±1.29 3.013±0.00 1.739±0.00 N/A 0.870±0.76 2.960±1.60 2.710±0.71 1.626±1.16
ENST00000534938 N/A N/A 1.141±0.00 1.018±0.00 2.228±0.00 2.415±0.00 3.162±0.00 N/A 2.331±0.00 3.920±0.00 N/A 4.938±2.35 N/A 1.616±0.00
ENST00000553615 8.021±0.00 5.307±0.00 0.775±0.00 5.797±0.00 10.314±0.00 8.094±0.00 1.390±0.57 3.240±2.38 2.738±0.00 3.909±0.00 2.807±0.00 5.090±2.73 4.679±1.17 5.484±3.15
ENST00000553673 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554973 N/A N/A 1.217±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556814 N/A N/A 0.645±0.00 1.766±0.00 3.254±0.00 1.577±0.00 N/A 1.934±0.00 1.754±0.00 N/A 2.420±0.00 3.600±1.52 7.206±0.00 2.094±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021243 ENSMUST00000021669 27.899±2.02 N/A 45.743±1.31 34.461±2.19 54.572±0.00 N/A 17.146±0.00 24.079±1.66 69.187±25.76 N/A 12.542±0.83 31.538±17.54 40.179±21.10 28.305±12.48
ENSMUST00000171040 30.850±0.00 N/A N/A N/A N/A N/A N/A 24.247±0.00 N/A N/A N/A 33.307±4.06 45.443±11.38 N/A
ENSMUST00000172241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021244 ENSMUST00000021670 1.560±1.00 1.199±0.00 3.893±1.45 11.987±6.60 0.995±0.24 0.715±0.11 1.599±0.39 1.573±0.18 1.591±0.94 1.194±0.34 1.152±0.42 3.947±6.02 4.333±2.93 10.188±5.36
ENSMUST00000101202 N/A N/A N/A N/A N/A 0.992±0.00 N/A N/A N/A N/A N/A N/A 4.255±0.06 N/A
ENSMUST00000164558 N/A N/A 2.200±0.60 20.837±0.00 N/A N/A N/A N/A 0.697±0.25 N/A 0.636±0.11 8.661±5.61 5.509±4.94 26.669±0.00
ENSMUST00000165803 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166605 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168977 1.694±0.49 4.990±0.00 N/A 3.587±0.61 2.411±1.07 2.128±1.16 1.232±0.29 1.714±1.13 1.263±0.49 3.259±0.23 0.622±0.14 2.071±1.34 2.506±1.31 7.317±2.36
ENSMUST00000169150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042350 ENSMUST00000043169 9.528±3.50 11.458±5.29 9.450±1.37 14.088±6.97 7.686±2.14 11.722±2.89 8.735±2.81 6.279±0.69 10.626±3.71 12.339±4.61 6.291±0.71 5.730±2.87 4.985±2.01 11.893±4.43
ENSMUST00000163231 N/A N/A N/A N/A 3.519±0.00 N/A N/A N/A N/A N/A N/A 9.848±0.00 N/A N/A
ENSMUST00000163372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165093 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165886 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000169161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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