| Transcript ID | Placenta |
|---|---|
| ENSMUST00000085222 | 0.025±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | transient receptor potential cation channel, subfamily M, member 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000085222  |
Trpm1-003 |
ENSMUSG00000030523 |
10090 | + |
7:64153835-64269775  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00081G | CIL_00081G_0002 | VISTA | 7:63656077-64260826 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005261 | IDA | cation channel activity |
| GO:0005262 | ISS | calcium channel activity |
| GO:0005886 | IEA | plasma membrane |
| GO:0007165 | IGI | signal transduction |
| GO:0007216 | ISS | G-protein coupled glutamate receptor signaling pathway |
| GO:0007601 | IEA | visual perception |
| GO:0016021 | IEA | integral component of membrane |
| GO:0035841 | IDA | new growing cell tip |
| GO:0046548 | IMP | retinal rod cell development |
| GO:0060402 | ISS | calcium ion transport into cytosol |
| GO:0070588 | ISS | calcium ion transmembrane transport |
| GO:0071482 | IMP | cellular response to light stimulus |
| GO:0098655 | IDA | cation transmembrane transport |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000088033
|
trpm3-201 | protein_coding | Danio_rerio | 0 | 298 |
|
ENSDART00000147188
|
trpm3-001 | protein_coding | Danio_rerio | 0 | 285 |
|
ENST00000256552
|
TRPM1-004 | protein_coding | Homo_sapiens | 0 | 4597 |
|
ENST00000397795
|
TRPM1-001 | protein_coding | Homo_sapiens | 0 | 4599 |
|
ENST00000542188
|
TRPM1-201 | protein_coding | Homo_sapiens | 0 | 4662 |
|
ENST00000557948
|
TRPM1-010 | retained_intron | Homo_sapiens | 0 | 630 |
|
ENST00000558070
|
TRPM1-009 | retained_intron | Homo_sapiens | 0 | 361 |
|
ENST00000558212
|
TRPM1-011 | retained_intron | Homo_sapiens | 0 | 634 |
|
ENST00000558445
|
TRPM1-008 | protein_coding | Homo_sapiens | 0 | 4658 |
|
ENST00000558768
|
TRPM1-007 | protein_coding | Homo_sapiens | 0 | 4252 |
|
ENST00000559177
|
TRPM1-002 | protein_coding | Homo_sapiens | 0 | 880 |
|
ENST00000560658
|
TRPM1-005 | nonsense_mediated_decay | Homo_sapiens | 0 | 1061 |
|
ENST00000560801
|
TRPM1-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 2412 |
|
ENST00000611448
|
TRPM1-202 | protein_coding | Homo_sapiens | 0 | 4678 |
|
ENST00000615583
|
TRPM1-203 | protein_coding | Homo_sapiens | 0 | 4614 |
|
ENST00000617515
|
TRPM1-204 | protein_coding | Homo_sapiens | 0 | 4615 |
|
ENST00000618210
|
TRPM1-205 | protein_coding | Homo_sapiens | 0 | 4523 |
|
ENST00000621076
|
TRPM1-206 | protein_coding | Homo_sapiens | 0 | 2423 |
