C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: leucine rich repeat containing 28
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558879 LRRC28-008 ENSG00000168904 9606 + 15:99251362-99386202 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MusclePlacentaTestisENST00000558879
Transcript ID Muscle Placenta Testis
ENST00000558879 2.036±0.00 3.061±0.00 10.269±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079Q CIL_00079Q_0002 CGP 15:99251362-99716466

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000189836 Lrrc28-011 protein_coding Mus_musculus 0 272
ENSMUST00000032775 Lrrc28-002 protein_coding Mus_musculus 0 272
ENSMUST00000190276 Lrrc28-007 protein_coding Mus_musculus 0 272
ENSMUST00000191035 Lrrc28-005 nonsense_mediated_decay Mus_musculus 0 272
ENSMUST00000053950 Lrrc28-001 protein_coding Mus_musculus 0 272
ENSMUST00000187953 Lrrc28-003 nonsense_mediated_decay Mus_musculus 0 244
ENSMUST00000190115 Lrrc28-006 processed_transcript Mus_musculus 6e-28 128

Loading