C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 62
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000559372 HNRNPA1P62-001 ENSG00000259228 9606 - 15:99284625-99285576 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLungOvaryENST00000559372
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Lung Ovary
ENST00000559372 0.026±0.00 0.041±0.00 0.068±0.00 0.064±0.00 0.048±0.00 0.361±0.33 0.244±0.00 0.063±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079Q CIL_00079Q_0002 CGP 15:99251362-99716466

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1007
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 970
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 839
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 830
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 758
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 597

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