Transcript ID | Adipose | Bladder | Kidney | Lung | Ovary | Placenta | Testis |
---|---|---|---|---|---|---|---|
ENST00000559397 | 28.590±0.00 | 10.847±0.00 | 15.557±10.61 | 22.949±0.00 | 40.875±0.00 | 89.631±16.66 | 52.941±0.00 |
Transcript Info |
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Description: | tropomyosin 1 (alpha) | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000559397 | TPM1-010 | ENSG00000140416 | 9606 | + | 15:63042758-63071900 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_000502 | CIL_000502_0002 | CGP | 15:62390526-63071915 |
CIL_00094O | CIL_00094O_0001 | VISTA | 15:62748846-63351985 |
CIL_00098V | CIL_00098V_0001 | VISTA | 15:62790346-63394142 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0001725 | IDA | stress fiber |
GO:0003065 | ISS | positive regulation of heart rate by epinephrine |
GO:0003779 | TAS | actin binding |
GO:0005200 | TAS | structural constituent of cytoskeleton |
GO:0005829 | TAS | cytosol |
GO:0005856 | TAS | cytoskeleton |
GO:0005862 | TAS | muscle thin filament tropomyosin |
GO:0006928 | TAS | cellular component movement |
GO:0006936 | TAS | muscle contraction |
GO:0006937 | TAS | regulation of muscle contraction |
GO:0007010 | TAS | cytoskeleton organization |
GO:0008016 | TAS | regulation of heart contraction |
GO:0008092 | IPI | cytoskeletal protein binding |
GO:0008307 | TAS | structural constituent of muscle |
GO:0030017 | TAS | sarcomere |
GO:0030049 | ISS | muscle filament sliding |
GO:0030336 | ISS | negative regulation of cell migration |
GO:0031529 | ISS | ruffle organization |
GO:0032059 | IMP | bleb |
GO:0032587 | IDA | ruffle membrane |
GO:0032781 | ISS | positive regulation of ATPase activity |
GO:0034614 | IEP | cellular response to reactive oxygen species |
GO:0042060 | ISS | wound healing |
GO:0045214 | IMP | sarcomere organization |
GO:0045785 | ISS | positive regulation of cell adhesion |
GO:0051496 | ISS | positive regulation of stress fiber assembly |
GO:0055010 | IMP | ventricular cardiac muscle tissue morphogenesis |
GO:0060048 | IMP | cardiac muscle contraction |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000113701 | Tpm1-010 | protein_coding | Mus_musculus | 0 | 1596 |
ENSMUST00000113705 | Tpm1-007 | protein_coding | Mus_musculus | 0 | 1452 |
ENSMUST00000113697 | Tpm1-006 | protein_coding | Mus_musculus | 0 | 1192 |
ENSMUST00000113696 | Tpm1-015 | protein_coding | Mus_musculus | 0 | 1192 |
ENSMUST00000034928 | Tpm1-008 | protein_coding | Mus_musculus | 0 | 1048 |
ENSMUST00000113695 | Tpm1-016 | protein_coding | Mus_musculus | 0 | 1048 |
ENSMUST00000113707 | Tpm1-001 | protein_coding | Mus_musculus | 0 | 1048 |
ENSMUST00000139046 | Tpm1-017 | nonsense_mediated_decay | Mus_musculus | 0 | 989 |
ENSMUST00000129733 | Tpm1-009 | nonsense_mediated_decay | Mus_musculus | 0 | 822 |
ENSMUST00000113684 | Tpm1-020 | protein_coding | Mus_musculus | 0 | 819 |
ENSMUST00000050905 | Tpm1-004 | protein_coding | Mus_musculus | 0 | 819 |
ENSMUST00000113689 | Tpm1-021 | protein_coding | Mus_musculus | 0 | 819 |
ENSMUST00000030185 | Tpm1-002 | protein_coding | Mus_musculus | 0 | 675 |
ENSMUST00000113687 | Tpm1-012 | protein_coding | Mus_musculus | 0 | 675 |
ENSMUST00000113686 | Tpm1-014 | protein_coding | Mus_musculus | 0 | 675 |
ENSMUST00000113685 | Tpm1-003 | protein_coding | Mus_musculus | 0 | 675 |
ENSMUST00000113693 | Tpm1-011 | protein_coding | Mus_musculus | 0 | 675 |
ENSMUST00000113690 | Tpm1-013 | protein_coding | Mus_musculus | 0 | 675 |
ENSMUST00000129466 | Tpm1-019 | retained_intron | Mus_musculus | 0 | 503 |
ENSDART00000039657 | tpma-201 | protein_coding | Danio_rerio | 0 | 462 |
ENSMUST00000131279 | Tpm1-018 | processed_transcript | Mus_musculus | 0 | 381 |
ENSDART00000054763 | tpma-202 | protein_coding | Danio_rerio | 0 | 375 |
ENSMUST00000107914 | Tpm2-001 | protein_coding | Mus_musculus | 0 | 342 |
ENSMUST00000030184 | Tpm2-002 | protein_coding | Mus_musculus | 0 | 329 |
ENSMUST00000107913 | Tpm2-201 | protein_coding | Mus_musculus | 0 | 291 |
ENSMUST00000150262 | Tpm2-003 | processed_transcript | Mus_musculus | 0 | 291 |
ENSMUST00000156899 | Tpm1-005 | processed_transcript | Mus_musculus | 2.8026e-45 | 187 |
ENSMUST00000150592 | Tpm2-004 | protein_coding | Mus_musculus | 2e-27 | 128 |