C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH3-domain GRB2-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564054 SH3GL3-006 ENSG00000140600 9606 + 15:83609270-83618642 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderOvaryTestisENST00000564054
Transcript ID Bladder Ovary Testis
ENST00000564054 0.131±0.00 0.194±0.00 15.469±7.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006KR CIL_0006KR_0001 CGP 15:83255903-83618743
CIL_0007U9 CIL_0007U9_0001 VISTA 15:83407808-84009696
CIL_000406 CIL_000406_0001 CGP 15:83447228-84039842

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177895 Sh3gl3-006 nonsense_mediated_decay Mus_musculus 0 490
ENSMUST00000177883 Sh3gl3-005 nonsense_mediated_decay Mus_musculus 0 490
ENSMUST00000032874 Sh3gl3-001 protein_coding Mus_musculus 0 490
ENSMUST00000178526 Sh3gl3-008 protein_coding Mus_musculus 0 470
ENSMUST00000179318 Sh3gl3-002 protein_coding Mus_musculus 0 335

Loading