C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, T type, alpha 1H subunit a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000154869 cacna1ha-001 ENSDARG00000060496 7955 + 3:39848570-39947223 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartENSDART00000154869
Transcript ID Heart
ENSDART00000154869 0.084±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021234 Cacna1g-201 protein_coding Mus_musculus 0 320
ENSMUST00000078496 Cacna1h-201 protein_coding Mus_musculus 0 287
ENSMUST00000100561 Cacna1g-005 protein_coding Mus_musculus 0 320
ENSMUST00000103166 Cacna1g-003 protein_coding Mus_musculus 0 320
ENSMUST00000107785 Cacna1g-006 protein_coding Mus_musculus 0 569
ENSMUST00000107786 Cacna1g-001 protein_coding Mus_musculus 0 320
ENSMUST00000107788 Cacna1g-009 protein_coding Mus_musculus 0 634
ENSMUST00000107789 Cacna1g-011 protein_coding Mus_musculus 0 320
ENSMUST00000107790 Cacna1g-010 protein_coding Mus_musculus 0 320
ENSMUST00000107791 Cacna1g-002 protein_coding Mus_musculus 0 569
ENSMUST00000107792 Cacna1g-004 protein_coding Mus_musculus 0 634
ENSMUST00000107793 Cacna1g-008 protein_coding Mus_musculus 0 569
ENSMUST00000152811 Cacna1g-007 processed_transcript Mus_musculus 0 252
ENSMUST00000159048 Cacna1h-002 protein_coding Mus_musculus 0 287
ENSMUST00000159610 Cacna1h-001 protein_coding Mus_musculus 0 287
ENSMUST00000160424 Cacna1i-001 protein_coding Mus_musculus 0 658
ENSMUST00000161454 Cacna1h-004 retained_intron Mus_musculus 0 287
ENSMUST00000162155 Cacna1i-002 nonsense_mediated_decay Mus_musculus 0 658
ENST00000348261 CACNA1H-001 protein_coding Homo_sapiens 0 601
ENST00000352832 CACNA1G-001 protein_coding Homo_sapiens 0 544
ENST00000354983 CACNA1G-201 protein_coding Homo_sapiens 0 544
ENST00000358244 CACNA1G-027 protein_coding Homo_sapiens 0 544
ENST00000358590 CACNA1H-201 protein_coding Homo_sapiens 0 673
ENST00000359106 CACNA1G-013 protein_coding Homo_sapiens 0 287
ENST00000360761 CACNA1G-008 protein_coding Homo_sapiens 0 287
ENST00000416767 CACNA1G-023 protein_coding Homo_sapiens 0 265
ENST00000429973 CACNA1G-007 protein_coding Homo_sapiens 0 603
ENST00000442258 CACNA1G-019 protein_coding Homo_sapiens 0 603
ENST00000502264 CACNA1G-031 protein_coding Homo_sapiens 0 287
ENST00000503436 CACNA1G-017 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000503485 CACNA1G-005 protein_coding Homo_sapiens 0 287
ENST00000503607 CACNA1G-033 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000504076 CACNA1G-014 nonsense_mediated_decay Homo_sapiens 0 436
ENST00000505165 CACNA1G-032 protein_coding Homo_sapiens 0 287
ENST00000506406 CACNA1G-012 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000507336 CACNA1G-011 protein_coding Homo_sapiens 0 544
ENST00000507510 CACNA1G-009 protein_coding Homo_sapiens 0 287
ENST00000507609 CACNA1G-016 protein_coding Homo_sapiens 0 265
ENST00000507896 CACNA1G-028 protein_coding Homo_sapiens 0 544
ENST00000510115 CACNA1G-018 protein_coding Homo_sapiens 0 544
ENST00000510366 CACNA1G-004 protein_coding Homo_sapiens 0 316
ENST00000511765 CACNA1G-010 nonsense_mediated_decay Homo_sapiens 0 494
ENST00000511768 CACNA1G-030 nonsense_mediated_decay Homo_sapiens 0 265
ENST00000512389 CACNA1G-024 protein_coding Homo_sapiens 0 544
ENST00000513689 CACNA1G-015 protein_coding Homo_sapiens 0 287
ENST00000513964 CACNA1G-002 protein_coding Homo_sapiens 0 287
ENST00000514079 CACNA1G-026 protein_coding Homo_sapiens 0 287
ENST00000514181 CACNA1G-021 protein_coding Homo_sapiens 0 516
ENST00000514717 CACNA1G-003 protein_coding Homo_sapiens 0 287
ENST00000515165 CACNA1G-020 protein_coding Homo_sapiens 0 287
ENST00000515411 CACNA1G-034 protein_coding Homo_sapiens 0 603
ENST00000515765 CACNA1G-025 protein_coding Homo_sapiens 0 544
ENST00000562079 CACNA1H-005 protein_coding Homo_sapiens 0 673
ENST00000564231 CACNA1H-003 protein_coding Homo_sapiens 0 601
ENST00000564927 CACNA1H-006 protein_coding Homo_sapiens 0 562
ENST00000565831 CACNA1H-002 protein_coding Homo_sapiens 0 673
ENST00000569107 CACNA1H-004 protein_coding Homo_sapiens 0 359

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