C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: si:ch73-379f7.5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000151012 si:ch73-379f7.5-001 ENSDARG00000096307 7955 + 6:372676-397390 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverMuscleENSDART00000151012
Transcript ID Heart Kidney Liver Muscle
ENSDART00000151012 0.052±0.01 0.285±0.00 0.023±0.00 0.161±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005244 IEA voltage-gated ion channel activity
GO:0005245 IEA voltage-gated calcium channel activity
GO:0005262 IEA calcium channel activity
GO:0005891 IEA voltage-gated calcium channel complex
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0006816 IEA calcium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078496 Cacna1h-201 protein_coding Mus_musculus 0 907
ENSMUST00000159048 Cacna1h-002 protein_coding Mus_musculus 0 907
ENSMUST00000159610 Cacna1h-001 protein_coding Mus_musculus 0 907
ENSMUST00000160424 Cacna1i-001 protein_coding Mus_musculus 0 1027
ENSMUST00000162155 Cacna1i-002 nonsense_mediated_decay Mus_musculus 0 1027
ENST00000348261 CACNA1H-001 protein_coding Homo_sapiens 0 503
ENST00000352832 CACNA1G-001 protein_coding Homo_sapiens 0 484
ENST00000354983 CACNA1G-201 protein_coding Homo_sapiens 0 484
ENST00000358244 CACNA1G-027 protein_coding Homo_sapiens 0 484
ENST00000358590 CACNA1H-201 protein_coding Homo_sapiens 0 915
ENST00000359106 CACNA1G-013 protein_coding Homo_sapiens 0 484
ENST00000360761 CACNA1G-008 protein_coding Homo_sapiens 0 484
ENST00000401624 CACNA1I-003 protein_coding Homo_sapiens 0 1055
ENST00000402142 CACNA1I-001 protein_coding Homo_sapiens 0 1055
ENST00000404898 CACNA1I-002 protein_coding Homo_sapiens 0 1055
ENST00000407673 CACNA1I-004 protein_coding Homo_sapiens 0 1055
ENST00000429973 CACNA1G-007 protein_coding Homo_sapiens 0 791
ENST00000442258 CACNA1G-019 protein_coding Homo_sapiens 0 791
ENST00000502264 CACNA1G-031 protein_coding Homo_sapiens 0 484
ENST00000503436 CACNA1G-017 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000503607 CACNA1G-033 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000504076 CACNA1G-014 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000505165 CACNA1G-032 protein_coding Homo_sapiens 0 484
ENST00000506406 CACNA1G-012 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000507336 CACNA1G-011 protein_coding Homo_sapiens 0 484
ENST00000507510 CACNA1G-009 protein_coding Homo_sapiens 0 484
ENST00000507609 CACNA1G-016 protein_coding Homo_sapiens 0 484
ENST00000507896 CACNA1G-028 protein_coding Homo_sapiens 0 484
ENST00000510115 CACNA1G-018 protein_coding Homo_sapiens 0 484
ENST00000511765 CACNA1G-010 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000511768 CACNA1G-030 nonsense_mediated_decay Homo_sapiens 0 484
ENST00000512389 CACNA1G-024 protein_coding Homo_sapiens 0 484
ENST00000514079 CACNA1G-026 protein_coding Homo_sapiens 0 484
ENST00000514181 CACNA1G-021 protein_coding Homo_sapiens 0 693
ENST00000515165 CACNA1G-020 protein_coding Homo_sapiens 0 484
ENST00000515411 CACNA1G-034 protein_coding Homo_sapiens 0 791
ENST00000515765 CACNA1G-025 protein_coding Homo_sapiens 0 484
ENST00000562079 CACNA1H-005 protein_coding Homo_sapiens 0 915
ENST00000564231 CACNA1H-003 protein_coding Homo_sapiens 0 503
ENST00000564927 CACNA1H-006 protein_coding Homo_sapiens 0 736
ENST00000565831 CACNA1H-002 protein_coding Homo_sapiens 0 915
ENST00000569107 CACNA1H-004 protein_coding Homo_sapiens 0 503

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