C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RNA binding motif protein, X-linked
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000568578 RBMX-008 ENSG00000147274 9606 - X:136869194-136880722 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryTestisENST00000568578
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENST00000568578 3.633±0.00 3.759±0.00 2.875±0.00 5.445±0.00 1.820±0.04 2.259±0.00 2.543±1.88 1.017±0.00 2.825±0.00 1.487±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PR CIL_0000PR_0002 CGP X:136665547-136880764

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000098470 Rbmx-004 protein_coding Mus_musculus 0 2148
ENSMUST00000114726 Rbmx-002 protein_coding Mus_musculus 0 952
ENSMUST00000114730 Rbmx-005 protein_coding Mus_musculus 0 952
ENSMUST00000143310 Rbmx-003 protein_coding Mus_musculus 0 721
ENSMUST00000049245 Rbmxl1-201 protein_coding Mus_musculus 0 712
ENSMUST00000140384 Rbmx-001 nonsense_mediated_decay Mus_musculus 0 643
ENSMUST00000094051 Gm7324-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000133346 Rbmx-006 protein_coding Mus_musculus 0 296

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