C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: NLR family, pyrin domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000571307 NLRP1-007 ENSG00000091592 9606 - 17:5529895-5584512 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000571307
Transcript ID Muscle
ENST00000571307 0.144±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002G8 CIL_0002G8_0001 CGP 17:5486285-5619424
CIL_0000N1 CIL_0000N1_0001 CGP 17:5499427-6124427

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000094046 Nlrp1b-201 protein_coding Mus_musculus 0 555
ENSMUST00000108516 Nlrp1b-001 protein_coding Mus_musculus 0 555
ENSMUST00000136493 Nlrp1b-003 nonsense_mediated_decay Mus_musculus 0 555
ENSMUST00000108514 Nlrp1b-202 protein_coding Mus_musculus 0 455
ENSMUST00000108515 Nlrp1b-002 protein_coding Mus_musculus 0 455
ENSMUST00000171546 Nlrp1c-ps-002 processed_transcript Mus_musculus 0 446
ENSMUST00000174668 Nlrp1c-ps-001 transcribed_unprocessed_pseudogene Mus_musculus 0 446

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