C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tumor protein p53 binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000572085 TP53BP1-015 ENSG00000067369 9606 - 15:43415222-43493156 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungMuscleENST00000572085
Transcript ID Breast Lung Muscle
ENST00000572085 2.309±0.00 2.819±0.00 0.559±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005YH CIL_0005YH_0001 CGP 15:43358172-43409771
CIL_0005YA CIL_0005YA_0001 CGP 15:43369221-43510728
CIL_0005YB CIL_0005YB_0001 CGP 15:43403061-43531620

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000110648 Trp53bp1-001 protein_coding Mus_musculus 0 2881
ENSMUST00000110647 Trp53bp1-002 protein_coding Mus_musculus 0 2815
ENSMUST00000131245 Trp53bp1-003 protein_coding Mus_musculus 0 2167
ENSMUST00000147540 Trp53bp1-007 nonsense_mediated_decay Mus_musculus 0 1932
ENSMUST00000135890 Trp53bp1-006 processed_transcript Mus_musculus 0 1709
ENSMUST00000132812 Trp53bp1-015 processed_transcript Mus_musculus 0 741
ENSMUST00000136617 Trp53bp1-004 processed_transcript Mus_musculus 0 665
ENSMUST00000124554 Trp53bp1-019 nonsense_mediated_decay Mus_musculus 0 638
ENSMUST00000154426 Trp53bp1-018 nonsense_mediated_decay Mus_musculus 0 614
ENSMUST00000140285 Trp53bp1-005 retained_intron Mus_musculus 0 508
ENSMUST00000129752 Trp53bp1-010 nonsense_mediated_decay Mus_musculus 0 488
ENSMUST00000124060 Trp53bp1-008 retained_intron Mus_musculus 0 370
ENSMUST00000147554 Trp53bp1-016 processed_transcript Mus_musculus 0 318
ENSMUST00000142400 Trp53bp1-017 protein_coding Mus_musculus 0 263
ENSMUST00000131426 Trp53bp1-009 retained_intron Mus_musculus 1.99965e-42 180

Loading