C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 4A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000577731 EIF4A1-034 ENSG00000161960 9606 + 17:7575188-7577567 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverMuscleOvaryENST00000577731
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary
ENST00000577731 40.487±0.00 73.198±0.00 84.047±0.00 160.366±0.00 35.167±0.00 64.355±0.00 95.474±0.00 44.642±0.00 191.541±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00037A CIL_00037A_0002 CGP 17:7561875-7578715

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000128519 Eif4a1-012 retained_intron Mus_musculus 0 765
ENSMUST00000163666 Eif4a1-001 protein_coding Mus_musculus 0 699
ENSMUST00000122226 Eif4a-ps4-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000072982 Gm5513-201 processed_pseudogene Mus_musculus 0 676
ENSMUST00000102589 Eif4a1-013 nonsense_mediated_decay Mus_musculus 0 577
ENSMUST00000123995 Eif4a1-002 retained_intron Mus_musculus 0 409

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