C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box helicase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578491 DDX5-023 ENSG00000108654 9606 - 17:64500824-64503096 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastKidneyLiverOvaryENST00000578491
Transcript ID Bladder Brain Breast Kidney Liver Ovary
ENST00000578491 153.057±0.00 112.221±0.00 275.658±0.00 70.115±0.00 167.545±0.00 153.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012I CIL_00012I_0001 CGP 17:64477785-64508199
CIL_00012F CIL_00012F_0001 CGP 17:64499616-64542461

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133426 Ddx5-002 nonsense_mediated_decay Mus_musculus 0 636
ENSMUST00000021062 Ddx5-001 protein_coding Mus_musculus 0 636
ENSMUST00000120566 Gm12183-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000106778 Ddx5-006 retained_intron Mus_musculus 0 523
ENSMUST00000119755 Gm12067-001 processed_pseudogene Mus_musculus 0 198

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