C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: DEAD (Asp-Glu-Ala-Asp) box helicase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000578758 DDX5-030 ENSG00000108654 9606 - 17:64500134-64502350 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012I CIL_00012I_0001 CGP 17:64477785-64508199
CIL_00012F CIL_00012F_0001 CGP 17:64499616-64542461

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021062 Ddx5-001 protein_coding Mus_musculus 0 911
ENSMUST00000120566 Gm12183-001 processed_pseudogene Mus_musculus 0 878
ENSMUST00000133426 Ddx5-002 nonsense_mediated_decay Mus_musculus 0 715
ENSMUST00000127481 Ddx5-007 nonsense_mediated_decay Mus_musculus 0 695
ENSMUST00000130172 Ddx5-009 processed_transcript Mus_musculus 0 625
ENSMUST00000119755 Gm12067-001 processed_pseudogene Mus_musculus 0 213
ENSMUST00000106778 Ddx5-006 retained_intron Mus_musculus 9e-22 108

Loading