C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000129585 Ddx5-003 ENSMUSG00000020719 10090 - 11:106785496-106789185 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonKidneyLiverOvaryTestisENSMUST00000129585
Transcript ID Adrenal Breast Colon Kidney Liver Ovary Testis
ENSMUST00000129585 205.890±15.54 104.606±15.28 68.845±14.54 46.580±0.00 27.205±4.71 124.788±17.31 228.920±25.91

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00012I CIL_00012I_0002 CGP 11:106768253-106789185
CIL_00012F CIL_00012F_0002 CGP 11:106780355-106819930

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001701 IMP in utero embryonic development
GO:0003712 IDA transcription cofactor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IC nucleus
GO:0007623 IMP circadian rhythm
GO:0030529 ISO ribonucleoprotein complex
GO:0045893 IDA positive regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225792 DDX5-001 protein_coding Homo_sapiens 0 824
ENST00000450599 DDX5-006 protein_coding Homo_sapiens 0 442
ENST00000540698 DDX5-003 nonsense_mediated_decay Homo_sapiens 0 372
ENST00000577922 DDX5-010 protein_coding Homo_sapiens 0 824
ENST00000578190 DDX5-027 protein_coding Homo_sapiens 0 577
ENST00000578400 DDX5-028 nonsense_mediated_decay Homo_sapiens 0 440
ENST00000578804 DDX5-005 protein_coding Homo_sapiens 0 701
ENST00000579091 DDX5-014 protein_coding Homo_sapiens 0 516
ENST00000581230 DDX5-002 retained_intron Homo_sapiens 0 824
ENST00000581693 DDX5-004 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000581697 DDX5-012 protein_coding Homo_sapiens 0 651
ENST00000581806 DDX5-009 protein_coding Homo_sapiens 0 595
ENST00000583212 DDX5-015 protein_coding Homo_sapiens 0 409
ENST00000583239 DDX5-013 protein_coding Homo_sapiens 0 542
ENST00000583562 DDX5-016 retained_intron Homo_sapiens 0 274
ENST00000584279 DDX5-011 protein_coding Homo_sapiens 0 560
ENST00000585060 DDX5-026 protein_coding Homo_sapiens 0 444
ENST00000585111 DDX5-008 protein_coding Homo_sapiens 0 244
ENST00000585223 DDX5-025 retained_intron Homo_sapiens 0 366

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