C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000584400  |
SMARCD2-006 |
ENSG00000108604 |
9606 | - |
17:63833912-63842698  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B9 | CIL_0009B9_0001 | VISTA | 17:63374232-63977730 |
| CIL_0006QA | CIL_0006QA_0001 | CGP | 17:63827152-63843065 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000021052
|
Smarcd2-001 | protein_coding | Mus_musculus | 0 | 1033 |
|
ENSMUST00000106843
|
Smarcd2-002 | protein_coding | Mus_musculus | 0 | 1033 |
|
ENSMUST00000132278
|
Smarcd2-004 | retained_intron | Mus_musculus | 0 | 597 |
|
ENSMUST00000174253
|
Smarcd2-007 | processed_transcript | Mus_musculus | 0 | 505 |
|
ENSMUST00000140255
|
Smarcd2-009 | protein_coding | Mus_musculus | 0 | 459 |
|
ENSMUST00000155243
|
Smarcd2-003 | processed_transcript | Mus_musculus | 0 | 390 |
|
ENSMUST00000155514
|
Smarcd2-005 | retained_intron | Mus_musculus | 5e-36 | 156 |
|
ENSMUST00000174017
|
Smarcd2-008 | retained_intron | Mus_musculus | 0.00000000000008 | 82 |
