Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	SMAD family member 2
ENST00000587421	SMAD2-007	ENSG00000175387	9606	-	18:47869352-47930362	protein_coding

Expression Patterns

No expression data.

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0008OV	CIL_0008OV_0001	VISTA	18:47242733-47843421
CIL_0008IS	CIL_0008IS_0001	VISTA	18:47260919-47861703
CIL_0008FI	CIL_0008FI_0001	VISTA	18:47646469-48247329
CIL_0008EL	CIL_0008EL_0001	VISTA	18:47706836-48309090

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0003700	IEA	sequence-specific DNA binding transcription factor activity
GO:0005622	IEA	intracellular
GO:0005667	IEA	transcription factor complex
GO:0006351	IEA	transcription, DNA-templated
GO:0006355	IEA	regulation of transcription, DNA-templated
GO:0007179	IEA	transforming growth factor beta receptor signaling pathway

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000025453	Smad2-002	protein_coding	Mus_musculus	0	616
ENSMUST00000171256	Smad2-005	protein_coding	Mus_musculus	0	616
ENSMUST00000168423	Smad2-001	protein_coding	Mus_musculus	0	616
ENSMUST00000091831	Smad2-003	protein_coding	Mus_musculus	0	375
ENSMUST00000113930	Smad2-004	protein_coding	Mus_musculus	0	348
ENSMUST00000165084	Smad2-007	protein_coding	Mus_musculus	0	348
ENSDART00000044756	smad2-201	protein_coding	Danio_rerio	0	327
ENSDART00000143608	smad2-004	protein_coding	Danio_rerio	0	327
ENSDART00000147653	smad2-002	protein_coding	Danio_rerio	0	327
ENSDART00000121892	smad2-001	protein_coding	Danio_rerio	0	327
ENSDART00000128579	smad2-202	protein_coding	Danio_rerio	0	322

Loading