C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rho guanine nucleotide exchange factor (GEF) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000594258 ARHGEF1-017 ENSG00000076928 9606 + 19:41897811-41902897 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENST00000594258
Transcript ID Muscle
ENST00000594258 0.395±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UK CIL_0003UK_0002 CGP 19:41877120-41930150
CIL_0003VE CIL_0003VE_0001 CGP 19:41883161-41959390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0035023 IEA regulation of Rho protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000145783 Arhgef1-005 processed_transcript Mus_musculus 0 1112
ENSMUST00000098683 Arhgef1-001 protein_coding Mus_musculus 0 1042
ENSMUST00000117796 Arhgef1-002 protein_coding Mus_musculus 0 1042
ENSMUST00000132751 Arhgef1-008 protein_coding Mus_musculus 0 1040
ENSMUST00000117419 Arhgef1-006 protein_coding Mus_musculus 0 773
ENSMUST00000047873 Arhgef1-003 protein_coding Mus_musculus 0 773
ENSMUST00000129928 Arhgef1-012 retained_intron Mus_musculus 0 239

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