C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Rho guanine nucleotide exchange factor (GEF) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000598812 ARHGEF1-014 ENSG00000076928 9606 + 19:41892634-41895373 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleENST00000598812
Transcript ID Breast Muscle
ENST00000598812 3.635±0.00 0.384±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003UK CIL_0003UK_0002 CGP 19:41877120-41930150
CIL_0003VE CIL_0003VE_0001 CGP 19:41883161-41959390

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005737 IEA cytoplasm
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000144714 Arhgef1-011 retained_intron Mus_musculus 0 281
ENSMUST00000117419 Arhgef1-006 protein_coding Mus_musculus 0 281
ENSMUST00000047873 Arhgef1-003 protein_coding Mus_musculus 0 281
ENSMUST00000117796 Arhgef1-002 protein_coding Mus_musculus 0 281
ENSMUST00000145783 Arhgef1-005 processed_transcript Mus_musculus 0 268
ENSMUST00000098683 Arhgef1-001 protein_coding Mus_musculus 0 268

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