C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 1 pseudogene 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000600054 EIF1P6-001 ENSG00000267938 9606 - 19:4347780-4349061 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastKidneyLiverOvaryTestisENST00000600054
Transcript ID Adipose Brain Breast Kidney Liver Ovary Testis
ENST00000600054 0.078±0.00 0.079±0.00 0.118±0.00 0.279±0.00 0.144±0.00 0.999±0.00 0.176±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QU CIL_0005QU_0002 CGP 19:4324043-4360086
CIL_0005GU CIL_0005GU_0002 CGP 19:4343527-4400547

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049385 Eif1-001 protein_coding Mus_musculus 0 385
ENSMUST00000178971 Gm6900-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000139408 Gm10157-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000179168 Gm16378-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000076828 Gm5265-201 processed_pseudogene Mus_musculus 0 355
ENSMUST00000119926 Gm14686-001 transcribed_processed_pseudogene Mus_musculus 0 350
ENSMUST00000088313 Emd-002 protein_coding Mus_musculus 0 350
ENSMUST00000086606 Eif1-ps1-201 processed_pseudogene Mus_musculus 0 344
ENSMUST00000139846 Eif1-003 processed_transcript Mus_musculus 0 340
ENSMUST00000121450 Eif1-ps3-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000152521 Eif1-004 protein_coding Mus_musculus 0 259
ENSMUST00000151513 Eif1-002 protein_coding Mus_musculus 0 243

Loading