C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10157
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139408 Gm10157-001 ENSMUSG00000066270 10090 - 9:118837613-118837955 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000139408
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000139408 0.711±0.22 0.181±0.01 0.104±0.06 0.871±0.66 0.699±0.21 1.735±0.49 0.989±0.36 0.666±0.76 0.969±0.26 0.352±0.20 0.583±0.31 0.157±0.11 3.386±0.67

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CZ CIL_0008CZ_0002 VISTA 9:118558597-119161666
CIL_00099X CIL_00099X_0002 VISTA 9:118563323-119168147
CIL_0005VQ CIL_0005VQ_0002 CGP 9:118606690-119043998

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310837 EIF1-003 processed_transcript Homo_sapiens 0 219
ENST00000421436 EIF1P1-001 processed_pseudogene Homo_sapiens 0 422
ENST00000423841 EIF1P3-001 processed_pseudogene Homo_sapiens 0 479
ENST00000428233 EIF1P2-001 processed_pseudogene Homo_sapiens 0 292
ENST00000462917 EIF1-002 retained_intron Homo_sapiens 0 294
ENST00000469257 EIF1-001 protein_coding Homo_sapiens 0 555
ENST00000469308 EIF1-005 processed_transcript Homo_sapiens 0 507
ENST00000482111 EIF1-004 retained_intron Homo_sapiens 0 342
ENST00000487533 EIF1P7-001 processed_pseudogene Homo_sapiens 0 438
ENST00000572664 EIF1P4-001 processed_pseudogene Homo_sapiens 0 377
ENST00000585002 EIF1P5-001 unprocessed_pseudogene Homo_sapiens 6e-29 130
ENST00000586699 EIF1-009 protein_coding Homo_sapiens 0 217
ENST00000591776 EIF1-010 protein_coding Homo_sapiens 0 549
ENST00000600054 EIF1P6-001 unprocessed_pseudogene Homo_sapiens 0 370

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